RNA–Protein interactions for RNA: ENST00000545930.5

DDB1-225, Transcript of damage specific DNA binding protein 1, human

TSL 2

Gene DDB1, Length 1,278 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-225	ENST00000545930		H3BQ06	376 aa	Predicted RBP	10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	EEF2K	O00418	725 aa	Known RBP	10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	FGF10	O15520	208 aa	Predicted RBP	10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	CEP104	O60308	925 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	ECI2	O75521	394 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	ZNF189	O75820	626 aa	Predicted RBP	10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	TJP3	O95049	919 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	TACR2	P21452	398 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	PTPN7	P35236	360 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	SERPINB6	P35237	376 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	TPI1	P60174	286 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	USP4	Q13107	963 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	PPP2R5E	Q16537	467 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	ATP13A4	Q4VNC1	1196 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	MPPE1	Q53F39	396 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	PPP6R3	Q5H9R7	873 aa	Predicted RBP	10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	MS4A13	Q5J8X5	152 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	FAM78A	Q5JUQ0	283 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	MPP7	Q5T2T1	576 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	CCDC181	Q5TID7	509 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	DAB2IP	Q5VWQ8	1189 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	CHSY1	Q86X52	802 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	MFSD6L	Q8IWD5	586 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	LZTR1	Q8N653	840 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	ACTRT1	Q8TDG2	376 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	NANOS1	Q8WY41	292 aa	Known RBP	10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	KRT35	Q92764	455 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	ELSPBP1	Q96BH3	223 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	TBC1D31	Q96DN5	1066 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	TMA16	Q96EY4	203 aa	Known RBP	10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	ZSWIM3	Q96MP5	696 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	PEBP4	Q96S96	227 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	PHF7	Q9BWX1	381 aa	Predicted RBP	10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	ZYG11B	Q9C0D3	744 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	PCDH18	Q9HCL0	1135 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	HOMER3	Q9NSC5	361 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	TTC7A	Q9ULT0	858 aa	Predicted RBP	10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	HS3ST4	Q9Y661	456 aa		10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	NUP210	Q8TEM1	1887 aa	Predicted RBP	10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	HELZ	P42694	1942 aa	Known RBP	10.01	□□□□□ -0.81
DDB1-225	ENST00000545930	DOCK8	Q8NF50	2099 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	DRGX	A6NNA5	263 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	HEPACAM2	A8MVW5	462 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930		E9PAM4	449 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	SRGAP2	O75044	1071 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	URI1	O94763	535 aa	Predicted RBP	10	□□□□□ -0.81
DDB1-225	ENST00000545930	PYGM	P11217	842 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	TCF4	P15884	667 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	EPHB2	P29323	1055 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	IFNAR2	P48551	515 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	DNA2	P51530	1060 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	ARSE	P51690	589 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	CDH4	P55283	916 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	OXCT1	P55809	520 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	PTS	Q03393	145 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	SEMA3B	Q13214	749 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	AUH	Q13825	339 aa	Known RBP	10	□□□□□ -0.81
DDB1-225	ENST00000545930	DPYSL3	Q14195	570 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	SMAD2	Q15796	467 aa	Known RBP	10	□□□□□ -0.81
DDB1-225	ENST00000545930	ZNF77	Q15935	545 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	C5orf22	Q49AR2	442 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	PREPL	Q4J6C6	727 aa	Predicted RBP	10	□□□□□ -0.81
DDB1-225	ENST00000545930	RAB6C	Q53S08	254 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	ANKRD20A8P	Q5CZ79	823 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	RAP1GAP2	Q684P5	730 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	TXNRD3NB	Q6F5E7	133 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	RWDD4	Q6NW29	188 aa	Known RBP	10	□□□□□ -0.81
DDB1-225	ENST00000545930	SPOCD1	Q6ZMY3	1216 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	FAM217A	Q8IXS0	508 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	RASGEF1C	Q8N431	466 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	TDRD5	Q8NAT2	981 aa	Known RBP	10	□□□□□ -0.81
DDB1-225	ENST00000545930	TTC16	Q8NEE8	873 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	MAFA	Q8NHW3	353 aa	Predicted RBP	10	□□□□□ -0.81
DDB1-225	ENST00000545930	ADAMTS19	Q8TE59	1207 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	RAPGEF5	Q92565	580 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	RPRD1A	Q96P16	312 aa	Predicted RBP	10	□□□□□ -0.81
DDB1-225	ENST00000545930	RNF157	Q96PX1	679 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	MYADM	Q96S97	322 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	PRMT1	Q99873	361 aa	Known RBP	10	□□□□□ -0.81
DDB1-225	ENST00000545930	FERMT1	Q9BQL6	677 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	10	□□□□□ -0.81
DDB1-225	ENST00000545930	OSBPL8	Q9BZF1	889 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	RAB6C	Q9H0N0	254 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	GPATCH2L	Q9NWQ4	482 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	CDC23	Q9UJX2	597 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	RAD54B	Q9Y620	910 aa		10	□□□□□ -0.81
DDB1-225	ENST00000545930	IGLV3-10	A0A075B6K4	115 aa		9.99	□□□□□ -0.81
DDB1-225	ENST00000545930	hCG_1818297	A0A087WSY0	165 aa		9.99	□□□□□ -0.81
DDB1-225	ENST00000545930		A0A1B0GVM2	712 aa		9.99	□□□□□ -0.81
DDB1-225	ENST00000545930	TCAF2	A6NFQ2	919 aa		9.99	□□□□□ -0.81
DDB1-225	ENST00000545930	WASH4P	A8MWX3	477 aa		9.99	□□□□□ -0.81
DDB1-225	ENST00000545930	APOL1	O14791	398 aa		9.99	□□□□□ -0.81
DDB1-225	ENST00000545930	CHAD	O15335	359 aa		9.99	□□□□□ -0.81
DDB1-225	ENST00000545930	NCAM2	O15394	837 aa		9.99	□□□□□ -0.81
DDB1-225	ENST00000545930	CLDN11	O75508	207 aa		9.99	□□□□□ -0.81
DDB1-225	ENST00000545930	LRIG2	O94898	1065 aa		9.99	□□□□□ -0.81
DDB1-225	ENST00000545930	NFATC1	O95644	943 aa		9.99	□□□□□ -0.81
DDB1-225	ENST00000545930	KLKB1	P03952	638 aa		9.99	□□□□□ -0.81
DDB1-225	ENST00000545930	RHOQ	P17081	205 aa		9.99	□□□□□ -0.81

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