RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 M0QYT0 321 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 PPP1R12AO14974 1030 aaPredicted RBP16.19■□□□□ 0.18
LDLR-204ENST00000545707 ZBTB14O43829 449 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 KLHL2O95198 593 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 POLBP06746 335 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 LYNP07948 512 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 CPA3P15088 417 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 IFRD2Q12894 506 aaPredicted RBP16.19■□□□□ 0.18
LDLR-204ENST00000545707 CCNIQ14094 377 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 SLC25A52Q3SY17 297 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 FBXO47Q5MNV8 452 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 STXBP5Q5T5C0 1151 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 STRA8Q7Z7C7 330 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 DEFB107AQ8IZN7 70 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 PPTC7Q8NI37 304 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 MAPK15Q8TD08 544 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 ZNF669Q96BR6 464 aaPredicted RBP16.19■□□□□ 0.18
LDLR-204ENST00000545707 SNX25Q9H3E2 840 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 SPATS2LQ9NUQ6 558 aaKnown RBP16.19■□□□□ 0.18
LDLR-204ENST00000545707 CPSF2Q9P2I0 782 aaKnown RBP16.19■□□□□ 0.18
LDLR-204ENST00000545707 G3BP2Q9UN86 482 aaKnown RBP16.19■□□□□ 0.18
LDLR-204ENST00000545707 KPNA7A9QM74 516 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 HACD1B0YJ81 288 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 OPHN1O60890 802 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 CCR10P46092 362 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 ASPHQ12797 758 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 CUL3Q13618 768 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 SLC9B1Q4ZJI4 515 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 HSP90AA5PQ58FG0 334 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 TMCO4Q5TGY1 634 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 SLC27A1Q6PCB7 646 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 STRADAQ7RTN6 431 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 OPTNQ96CV9 577 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 MFSD3Q96ES6 412 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 MROH8Q9H579 483 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 COG4Q9H9E3 785 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 ANLNQ9NQW6 1124 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 PIGVQ9NUD9 493 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 CACNG4Q9UBN1 327 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 ADAMTS6Q9UKP5 1117 aa16.19■□□□□ 0.18
LDLR-204ENST00000545707 GOLGA8QA0A0J9YX86 632 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 GOLGA8OA6NCC3 632 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 GOLGA8NF8WBI6 632 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 ATP9BO43861 1147 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 STK10O94804 968 aaKnown RBP16.18■□□□□ 0.18
LDLR-204ENST00000545707 TPH1P17752 444 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 GP5P40197 560 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 SOX4Q06945 474 aaPredicted RBP16.18■□□□□ 0.18
LDLR-204ENST00000545707 FSTL4Q6MZW2 842 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 CRYBG2Q8N1P7 616 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 LRRC52Q8N7C0 313 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 DNAAF3Q8N9W5 541 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 GORASP1Q9BQQ3 440 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 PAPOLBQ9NRJ5 636 aaKnown RBP16.18■□□□□ 0.18
LDLR-204ENST00000545707 UBP1Q9NZI7 540 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 KLHL8Q9P2G9 620 aaPredicted RBP16.18■□□□□ 0.18
LDLR-204ENST00000545707 CEP350Q5VT06 3117 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 I6L893 689 aaPredicted RBP16.18■□□□□ 0.18
LDLR-204ENST00000545707 CXCL11O14625 94 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 RNASEH1O60930 286 aaKnown RBP16.18■□□□□ 0.18
LDLR-204ENST00000545707 ITGAXP20702 1163 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 SAT1P21673 171 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 CRABP2P29373 138 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 POLE2P56282 527 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 PPP2R5DQ14738 602 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 DCAF4L1Q3SXM0 396 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 SFT2D3Q587I9 215 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 CERCAMQ5T4B2 595 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 OSTM1Q86WC4 334 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 ADAMTS10Q9H324 1103 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 PLEKHA5Q9HAU0 1116 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 DDX43Q9NXZ2 648 aaKnown RBP16.18■□□□□ 0.18
LDLR-204ENST00000545707 CDH22Q9UJ99 828 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 SORCS3Q9UPU3 1222 aa16.18■□□□□ 0.18
LDLR-204ENST00000545707 SMIM28A0A1B0GU29 152 aa16.17■□□□□ 0.18
LDLR-204ENST00000545707 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.17■□□□□ 0.18
LDLR-204ENST00000545707 TOMM70O94826 608 aa16.17■□□□□ 0.18
LDLR-204ENST00000545707 LTFP02788 710 aa16.17■□□□□ 0.18
LDLR-204ENST00000545707 FESP07332 822 aa16.17■□□□□ 0.18
LDLR-204ENST00000545707 GRK2P25098 689 aa16.17■□□□□ 0.18
LDLR-204ENST00000545707 GLUD2P49448 558 aa16.17■□□□□ 0.18
LDLR-204ENST00000545707 OR52B2Q96RD2 323 aa16.17■□□□□ 0.18
LDLR-204ENST00000545707 FAM124BQ9H5Z6 455 aaPredicted RBP16.17■□□□□ 0.18
LDLR-204ENST00000545707 GPAMQ9HCL2 828 aa16.17■□□□□ 0.18
LDLR-204ENST00000545707 SNX10Q9Y5X0 201 aa16.17■□□□□ 0.18
LDLR-204ENST00000545707 EEF2KO00418 725 aaKnown RBP16.17■□□□□ 0.18
LDLR-204ENST00000545707 HARS2P49590 506 aaKnown RBP16.17■□□□□ 0.18
LDLR-204ENST00000545707 PDK1Q15118 436 aa16.17■□□□□ 0.18
LDLR-204ENST00000545707 SLC30A9Q6PML9 568 aa16.17■□□□□ 0.18
LDLR-204ENST00000545707 ANKRD13AQ8IZ07 590 aa16.17■□□□□ 0.18
LDLR-204ENST00000545707 WDR55Q9H6Y2 383 aaPredicted RBP16.17■□□□□ 0.18
LDLR-204ENST00000545707 DNAJC28Q9NX36 388 aa16.17■□□□□ 0.18
LDLR-204ENST00000545707 A0A096LPK6 155 aa16.16■□□□□ 0.18
LDLR-204ENST00000545707 PIRO00625 290 aa16.16■□□□□ 0.18
LDLR-204ENST00000545707 ZBTB24O43167 697 aaPredicted RBP16.16■□□□□ 0.18
LDLR-204ENST00000545707 FKBP6O75344 327 aa16.16■□□□□ 0.18
LDLR-204ENST00000545707 HSPA4LO95757 839 aa16.16■□□□□ 0.18
LDLR-204ENST00000545707 ATP5BP06576 529 aaKnown RBP16.16■□□□□ 0.18
LDLR-204ENST00000545707 MX2P20592 715 aa16.16■□□□□ 0.18
LDLR-204ENST00000545707 PEX2P28328 305 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms