RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	CELA2A	P08217	269 aa		4.7	□□□□□ -1.66
RAP1B-231	ENST00000544639	CNP	P09543	421 aa	Known RBP	4.7	□□□□□ -1.66
RAP1B-231	ENST00000544639	CKMT1A	P12532	417 aa		4.7	□□□□□ -1.66
RAP1B-231	ENST00000544639	ACP5	P13686	325 aa		4.7	□□□□□ -1.66
RAP1B-231	ENST00000544639	PRPH2	P23942	346 aa		4.7	□□□□□ -1.66
RAP1B-231	ENST00000544639	PNPLA4	P41247	253 aa		4.7	□□□□□ -1.66
RAP1B-231	ENST00000544639	MDGA2	Q7Z553	956 aa		4.7	□□□□□ -1.66
RAP1B-231	ENST00000544639	NEK8	Q86SG6	692 aa		4.7	□□□□□ -1.66
RAP1B-231	ENST00000544639	LRRTM4	Q86VH4	590 aa		4.7	□□□□□ -1.66
RAP1B-231	ENST00000544639	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.7	□□□□□ -1.66
RAP1B-231	ENST00000544639	IGFBPL1	Q8WX77	278 aa		4.7	□□□□□ -1.66
RAP1B-231	ENST00000544639	HERVK_113	Q902F9	699 aa		4.7	□□□□□ -1.66
RAP1B-231	ENST00000544639	QTRT1	Q9BXR0	403 aa	Known RBP	4.7	□□□□□ -1.66
RAP1B-231	ENST00000544639	CLPB	Q9H078	707 aa		4.7	□□□□□ -1.66
RAP1B-231	ENST00000544639	RMI1	Q9H9A7	625 aa		4.7	□□□□□ -1.66
RAP1B-231	ENST00000544639	TXNRD2	Q9NNW7	524 aa		4.7	□□□□□ -1.66
RAP1B-231	ENST00000544639	RRN3	Q9NYV6	651 aa		4.7	□□□□□ -1.66
RAP1B-231	ENST00000544639	DNAJC16	Q9Y2G8	782 aa		4.7	□□□□□ -1.66
RAP1B-231	ENST00000544639	RRP7A	Q9Y3A4	280 aa	Known RBP	4.7	□□□□□ -1.66
RAP1B-231	ENST00000544639	LMTK3	Q96Q04	1460 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	C2CD4B	A6NLJ0	364 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	MCIDAS	D6RGH6	385 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	NCAM2	O15394	837 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	USP12	O75317	370 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	LYL1	P12980	280 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	TFEB	P19484	476 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	ATP5F1	P24539	256 aa	Predicted RBP	4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	ARHGAP25	P42331	645 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	ADPRH	P54922	357 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	HNRNPA0	Q13151	305 aa	Known RBP	4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	THOC5	Q13769	683 aa	Known RBP	4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	DAZAP2	Q15038	168 aa	Predicted RBP	4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	TAF12	Q16514	161 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	GPR162	Q16538	588 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	SUPT20HL1	Q3ZLR7	823 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	CTXN3	Q4LDR2	81 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	KIAA1614	Q5VZ46	1190 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	SLC18B1	Q6NT16	456 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	YTHDF3	Q7Z739	585 aa	Known RBP	4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	UBE2Q1	Q7Z7E8	422 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	CPO	Q8IVL8	374 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	LINS1	Q8NG48	757 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	BCAS4	Q8TDM0	211 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	KAT2B	Q92831	832 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	TWNK	Q96RR1	684 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	HDHD5	Q9BXW7	423 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	RIC8A	Q9NPQ8	531 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	PI4KB	Q9UBF8	816 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	PKP3	Q9Y446	797 aa		4.69	□□□□□ -1.66
RAP1B-231	ENST00000544639	CYP2D7	A0A087X1C5	515 aa		4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	SAC3D1	A6NKF1	404 aa		4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	MAPK9	P45984	424 aa		4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	SLC12A2	P55011	1212 aa		4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	C21orf58	P58505	322 aa		4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	GHRHR	Q02643	423 aa		4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	SRSF4	Q08170	494 aa	Known RBP	4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	ALKBH1	Q13686	389 aa	Known RBP	4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	EARS2	Q5JPH6	523 aa	Known RBP	4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	MAP3K21	Q5TCX8	1036 aa		4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	LIPM	Q5VYY2	423 aa		4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	PAPD7	Q5XG87	772 aa	Known RBP	4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	SRRM1	Q8IYB3	904 aa	Known RBP	4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	ARL14EP	Q8N8R7	260 aa	Predicted RBP	4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	FAM47B	Q8NA70	645 aa		4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	WIPF2	Q8TF74	440 aa	Predicted RBP	4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	NOD2	Q9HC29	1040 aa		4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	MOV10	Q9HCE1	1003 aa	Known RBP	4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	GJD2	Q9UKL4	321 aa		4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	DTX4	Q9Y2E6	619 aa		4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	LRRFIP2	Q9Y608	721 aa	Known RBP	4.68	□□□□□ -1.66
RAP1B-231	ENST00000544639	CCDC189	A1A4V9	331 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639		E5RJQ4	531 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	TP73	O15350	636 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	CD63	P08962	238 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	PKM	P14618	531 aa	Known RBP	4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	AVPR2	P30518	371 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	SLC12A1	Q13621	1099 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	SEMA3A	Q14563	771 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	PGM5	Q15124	567 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	ANKRD1	Q15327	319 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	SLC9C1	Q4G0N8	1177 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	GXYLT1	Q4G148	440 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	HSP90AB4P	Q58FF6	505 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	KIAA1755	Q5JYT7	1200 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	CBWD5	Q5RIA9	395 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	LRCH2	Q5VUJ6	765 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	MTFR2	Q6P444	385 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	BBS12	Q6ZW61	710 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	TMEM200A	Q86VY9	491 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	CNGA4	Q8IV77	575 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	SCN4B	Q8IWT1	228 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	USP38	Q8NB14	1042 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	KCNJ9	Q92806	393 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	USP13	Q92995	863 aa	Predicted RBP	4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	RBM17	Q96I25	401 aa	Known RBP	4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	ADAD1	Q96M93	576 aa	Known RBP	4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	PRSS22	Q9GZN4	317 aa		4.67	□□□□□ -1.66
RAP1B-231	ENST00000544639	THAP1	Q9NVV9	213 aa		4.67	□□□□□ -1.66

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