RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 ZNF707Q96C28 371 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-222ENST00000544585 VRK1Q99986 396 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-222ENST00000544585 HERC2P3Q9BVR0 1158 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 MYLK2Q9H1R3 596 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 IL25Q9H293 177 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 EPC1Q9H2F5 836 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 C6orf50Q9HD87 102 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 SARS2Q9NP81 518 aaKnown RBP6.65□□□□□ -1.34
CPSF7-222ENST00000544585 SUCLA2Q9P2R7 463 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-222ENST00000544585 SAE1Q9UBE0 346 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-222ENST00000544585 ZNF69Q9UC07 566 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 FEZ2Q9UHY8 353 aaPredicted RBP6.65□□□□□ -1.34
CPSF7-222ENST00000544585 MAGEL2Q9UJ55 1249 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 CDH7Q9ULB5 785 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 RAB23Q9ULC3 237 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 PIN4Q9Y237 131 aaKnown RBP6.65□□□□□ -1.34
CPSF7-222ENST00000544585 CEP83Q9Y592 693 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 PCDHGB3Q9Y5G1 929 aa6.65□□□□□ -1.34
CPSF7-222ENST00000544585 FASNP49327 2511 aaKnown RBP6.65□□□□□ -1.35
CPSF7-222ENST00000544585 ZNF292O60281 2723 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 GPR179Q6PRD1 2367 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 A0A0A6YYK5 440 aaPredicted RBP6.64□□□□□ -1.35
CPSF7-222ENST00000544585 SLC30A4O14863 429 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 ASAP2O43150 1006 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 PRAMEF4O60810 478 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 TMEM127O75204 238 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 FSBPO95073 299 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 IL18RAPO95256 599 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 POMCP01189 267 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 IGHDP01880 384 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 HNRNPA1P09651 372 aaKnown RBP eCLIP6.64□□□□□ -1.35
CPSF7-222ENST00000544585 LTA4HP09960 611 aaKnown RBP6.64□□□□□ -1.35
CPSF7-222ENST00000544585 SPATA31D3P0C874 917 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 TGM1P22735 817 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 OR1G1P47890 313 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 FMO1Q01740 532 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 CD69Q07108 199 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 DAG1Q14118 895 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 RAB39AQ14964 217 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 UBXN2BQ14CS0 331 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 ACAP1Q15027 740 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 PLCL1Q15111 1095 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 CCDC38Q502W7 563 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 GRAMD4Q6IC98 578 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 HIBCHQ6NVY1 386 aaPredicted RBP6.64□□□□□ -1.35
CPSF7-222ENST00000544585 TLDC1Q6P9B6 456 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 ZNF852Q6ZMS4 543 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 MMS22LQ6ZRQ5 1243 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 SPATA31D4Q6ZUB0 917 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 RTL10Q7L3V2 364 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 TAS1R1Q7RTX1 841 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 PALB2Q86YC2 1186 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 RHPN2Q8IUC4 686 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 SYTL1Q8IYJ3 562 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 COLGALT2Q8IYK4 626 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 RNF168Q8IYW5 571 aaPredicted RBP6.64□□□□□ -1.35
CPSF7-222ENST00000544585 FAM26EQ8N5C1 309 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 DTX3Q8N9I9 347 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 RAB24Q969Q5 203 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 ZC3H10Q96K80 434 aaKnown RBP6.64□□□□□ -1.35
CPSF7-222ENST00000544585 TMEM209Q96SK2 561 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 TACO1Q9BSH4 297 aaKnown RBP6.64□□□□□ -1.35
CPSF7-222ENST00000544585 SOX7Q9BT81 388 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 RPP25Q9BUL9 199 aaKnown RBP6.64□□□□□ -1.35
CPSF7-222ENST00000544585 HAPLN2Q9GZV7 340 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 RNF32Q9H0A6 362 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 ZMYND12Q9H0C1 365 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 LTB4R2Q9NPC1 389 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 CALCOCO1Q9P1Z2 691 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.64□□□□□ -1.35
CPSF7-222ENST00000544585 DNAI1Q9UI46 699 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 SMG5Q9UPR3 1016 aaKnown RBP6.64□□□□□ -1.35
CPSF7-222ENST00000544585 PCDHGB2Q9Y5G2 931 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 RBM8AQ9Y5S9 174 aaKnown RBP6.64□□□□□ -1.35
CPSF7-222ENST00000544585 SPTBN2O15020 2390 aa6.64□□□□□ -1.35
CPSF7-222ENST00000544585 CCDC196A0A1B0GTZ2 297 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 ESYT2A0FGR8 921 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 ABLIM1O14639 778 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 APOL1O14791 398 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 ADAMTS3O15072 1205 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 DKC1O60832 514 aaKnown RBP eCLIP6.63□□□□□ -1.35
CPSF7-222ENST00000544585 LY86O95711 162 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 RETP07949 1114 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 HSD3B1P14060 373 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 TSHRP16473 764 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 AXLP30530 894 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 PRKCEQ02156 737 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 BLMHQ13867 455 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 STARD3Q14849 445 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 MAPRE1Q15691 268 aaKnown RBP6.63□□□□□ -1.35
CPSF7-222ENST00000544585 WDR72Q3MJ13 1102 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 TTC22Q5TAA0 569 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 LAIR1Q6GTX8 287 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 PARM1Q6UWI2 310 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 GET4Q7L5D6 327 aaPredicted RBP6.63□□□□□ -1.35
CPSF7-222ENST00000544585 MICU3Q86XE3 530 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 ZNF527Q8NB42 609 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 PPP1R14CQ8TAE6 165 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 EXOC6Q8TAG9 804 aa6.63□□□□□ -1.35
CPSF7-222ENST00000544585 BICD2Q8TD16 824 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms