RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 NUP85Q9BW27 656 aa19.71■□□□□ 0.75
DDX55-211ENST00000544429 DEF6Q9H4E7 631 aa19.71■□□□□ 0.75
DDX55-211ENST00000544429 SPTLC3Q9NUV7 552 aa19.71■□□□□ 0.75
DDX55-211ENST00000544429 IMPACTQ9P2X3 320 aa19.71■□□□□ 0.75
DDX55-211ENST00000544429 OR12D3Q9UGF7 316 aa19.71■□□□□ 0.75
DDX55-211ENST00000544429 FZD10Q9ULW2 581 aa19.71■□□□□ 0.75
DDX55-211ENST00000544429 OR51B4Q9Y5P0 310 aa19.71■□□□□ 0.75
DDX55-211ENST00000544429 DMDP11532 3685 aa19.71■□□□□ 0.75
DDX55-211ENST00000544429 USP34Q70CQ2 3546 aa19.71■□□□□ 0.75
DDX55-211ENST00000544429 CCDC163A0A0D9SF12 145 aa19.7■□□□□ 0.74
DDX55-211ENST00000544429 FAM72CH0Y354 149 aa19.7■□□□□ 0.74
DDX55-211ENST00000544429 H2AFZP0C0S5 128 aa19.7■□□□□ 0.74
DDX55-211ENST00000544429 SLC12A1Q13621 1099 aa19.7■□□□□ 0.74
DDX55-211ENST00000544429 PTPRNQ16849 979 aa19.7■□□□□ 0.74
DDX55-211ENST00000544429 EOGTQ5NDL2 527 aa19.7■□□□□ 0.74
DDX55-211ENST00000544429 FAM72AQ5TYM5 149 aa19.7■□□□□ 0.74
DDX55-211ENST00000544429 FAM72DQ6L9T8 149 aa19.7■□□□□ 0.74
DDX55-211ENST00000544429 H2AFVQ71UI9 128 aa19.7■□□□□ 0.74
DDX55-211ENST00000544429 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.7■□□□□ 0.74
DDX55-211ENST00000544429 FAM72BQ86X60 149 aa19.7■□□□□ 0.74
DDX55-211ENST00000544429 PEBP4Q96S96 227 aa19.7■□□□□ 0.74
DDX55-211ENST00000544429 RETREG1Q9H6L5 497 aa19.7■□□□□ 0.74
DDX55-211ENST00000544429 KIAA1522Q9P206 1035 aaPredicted RBP19.7■□□□□ 0.74
DDX55-211ENST00000544429 EBF1Q9UH73 591 aa19.7■□□□□ 0.74
DDX55-211ENST00000544429 A0A1W2PQF6 199 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 H0Y626 953 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 LILRB5O75023 590 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 C7P10643 843 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 L1CAMP32004 1257 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 PCK1P35558 622 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 DGKEP52429 567 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 NHLH1Q02575 133 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 DMWDQ09019 674 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 PIGHQ14442 188 aaPredicted RBP19.69■□□□□ 0.74
DDX55-211ENST00000544429 TCEAL1Q15170 157 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 PLEKHG6Q3KR16 790 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 PITRM1Q5JRX3 1037 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 MBLAC2Q68D91 279 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 LRRC31Q6UY01 552 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 NLRP14Q86W24 1093 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 RASSF3Q86WH2 238 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 CCDC170Q8IYT3 715 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 UCMAQ8WVF2 138 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 SORCS1Q8WY21 1168 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 MYO19Q96H55 970 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 NCAPGQ9BPX3 1015 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 TMEM245Q9H330 911 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 ZSCAN32Q9NX65 697 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 UVRAGQ9P2Y5 699 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 INTUQ9ULD6 942 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 SLC8A2Q9UPR5 921 aa19.69■□□□□ 0.74
DDX55-211ENST00000544429 PLXND1Q9Y4D7 1925 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 RNF8O76064 485 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 MTA2O94776 668 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 LRIG2O94898 1065 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 DLDP09622 509 aaKnown RBP19.68■□□□□ 0.74
DDX55-211ENST00000544429 DESP17661 470 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 MIPP30301 263 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 CSKP41240 450 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 NBL1P41271 181 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 IL12RB1P42701 662 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 NRLP54845 237 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 OXCT1P55809 520 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 ZNF234Q14588 700 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 E2F5Q15329 346 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 SCYL2Q6P3W7 929 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 SETD3Q86TU7 594 aaPredicted RBP19.68■□□□□ 0.74
DDX55-211ENST00000544429 TMEM139Q8IV31 216 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 PSTKQ8IV42 348 aaKnown RBP19.68■□□□□ 0.74
DDX55-211ENST00000544429 CHPFQ8IZ52 775 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 APCDD1Q8J025 514 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 PYROXD2Q8N2H3 581 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 CTNNBL1Q8WYA6 563 aaPredicted RBP19.68■□□□□ 0.74
DDX55-211ENST00000544429 FEM1AQ9BSK4 669 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 CIPCQ9C0C6 399 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 ZYG11BQ9C0D3 744 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 CACNA2D2Q9NY47 1150 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 MPP6Q9NZW5 540 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 ANAPC7Q9UJX3 599 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 PCDHGA2Q9Y5H1 932 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 STON1Q9Y6Q2 735 aa19.68■□□□□ 0.74
DDX55-211ENST00000544429 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.67■□□□□ 0.74
DDX55-211ENST00000544429 WASH3PC4AMC7 463 aa19.67■□□□□ 0.74
DDX55-211ENST00000544429 SRGAP2O75044 1071 aa19.67■□□□□ 0.74
DDX55-211ENST00000544429 APBB3O95704 486 aa19.67■□□□□ 0.74
DDX55-211ENST00000544429 MZF1P28698 734 aaPredicted RBP19.67■□□□□ 0.74
DDX55-211ENST00000544429 VASPP50552 380 aaPredicted RBP19.67■□□□□ 0.74
DDX55-211ENST00000544429 ZNF177Q13360 481 aaPredicted RBP19.67■□□□□ 0.74
DDX55-211ENST00000544429 EFHC2Q5JST6 749 aa19.67■□□□□ 0.74
DDX55-211ENST00000544429 CCDC117Q8IWD4 279 aaPredicted RBP19.67■□□□□ 0.74
DDX55-211ENST00000544429 KDM1BQ8NB78 822 aa19.67■□□□□ 0.74
DDX55-211ENST00000544429 ZNF564Q8TBZ8 553 aaPredicted RBP19.67■□□□□ 0.74
DDX55-211ENST00000544429 BTBD6Q96KE9 485 aa19.67■□□□□ 0.74
DDX55-211ENST00000544429 MRGPRX3Q96LB0 322 aa19.67■□□□□ 0.74
DDX55-211ENST00000544429 HHIPQ96QV1 700 aa19.67■□□□□ 0.74
DDX55-211ENST00000544429 IP6K2Q9UHH9 426 aa19.67■□□□□ 0.74
DDX55-211ENST00000544429 EIF3CLB5ME19 914 aaKnown RBP19.66■□□□□ 0.74
DDX55-211ENST00000544429 PROB1E7EW31 1015 aa19.66■□□□□ 0.74
DDX55-211ENST00000544429 ASLP04424 464 aa19.66■□□□□ 0.74
DDX55-211ENST00000544429 ATP5BP06576 529 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms