RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 EVLQ9UI08 416 aaPredicted RBP24■■□□□ 1.43
CHFR-222ENST00000544093 INTS6Q9UL03 887 aaKnown RBP24■■□□□ 1.43
CHFR-222ENST00000544093 HS3ST4Q9Y661 456 aa24■■□□□ 1.43
CHFR-222ENST00000544093 LAMA1P25391 3075 aa23.99■■□□□ 1.43
CHFR-222ENST00000544093 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.99■■□□□ 1.43
CHFR-222ENST00000544093 SYCE3A1L190 88 aa23.99■■□□□ 1.43
CHFR-222ENST00000544093 CLDN11O75508 207 aa23.99■■□□□ 1.43
CHFR-222ENST00000544093 CALB1P05937 261 aa23.99■■□□□ 1.43
CHFR-222ENST00000544093 RDXP35241 583 aaKnown RBP23.99■■□□□ 1.43
CHFR-222ENST00000544093 FLT3P36888 993 aa23.99■■□□□ 1.43
CHFR-222ENST00000544093 PTGER3P43115 390 aa23.99■■□□□ 1.43
CHFR-222ENST00000544093 ECT2LQ008S8 904 aa23.99■■□□□ 1.43
CHFR-222ENST00000544093 ZNF177Q13360 481 aaPredicted RBP23.99■■□□□ 1.43
CHFR-222ENST00000544093 C5orf22Q49AR2 442 aa23.99■■□□□ 1.43
CHFR-222ENST00000544093 C2CD6Q53TS8 623 aa23.99■■□□□ 1.43
CHFR-222ENST00000544093 RNF219Q5W0B1 726 aaPredicted RBP23.99■■□□□ 1.43
CHFR-222ENST00000544093 PHF13Q86YI8 300 aaPredicted RBP23.99■■□□□ 1.43
CHFR-222ENST00000544093 CEP76Q8TAP6 659 aa23.99■■□□□ 1.43
CHFR-222ENST00000544093 SLC6A17Q9H1V8 727 aa23.99■■□□□ 1.43
CHFR-222ENST00000544093 ADAM22Q9P0K1 906 aa23.99■■□□□ 1.43
CHFR-222ENST00000544093 VANGL2Q9ULK5 521 aa23.99■■□□□ 1.43
CHFR-222ENST00000544093 HLA-EP13747 358 aa23.98■■□□□ 1.43
CHFR-222ENST00000544093 NNMTP40261 264 aa23.98■■□□□ 1.43
CHFR-222ENST00000544093 TPMTP51580 245 aa23.98■■□□□ 1.43
CHFR-222ENST00000544093 PLK1P53350 603 aa23.98■■□□□ 1.43
CHFR-222ENST00000544093 ATXN1P54253 815 aaKnown RBP23.98■■□□□ 1.43
CHFR-222ENST00000544093 ZNF33AQ06730 810 aa23.98■■□□□ 1.43
CHFR-222ENST00000544093 IQCB1Q15051 598 aa23.98■■□□□ 1.43
CHFR-222ENST00000544093 CLEC16AQ2KHT3 1053 aa23.98■■□□□ 1.43
CHFR-222ENST00000544093 SKOR2Q2VWA4 1001 aaPredicted RBP23.98■■□□□ 1.43
CHFR-222ENST00000544093 PEAR1Q5VY43 1037 aaPredicted RBP23.98■■□□□ 1.43
CHFR-222ENST00000544093 LRRC31Q6UY01 552 aa23.98■■□□□ 1.43
CHFR-222ENST00000544093 BNIPLQ7Z465 357 aa23.98■■□□□ 1.43
CHFR-222ENST00000544093 SLC30A5Q8TAD4 765 aa23.98■■□□□ 1.43
CHFR-222ENST00000544093 AGPAT1Q99943 283 aa23.98■■□□□ 1.43
CHFR-222ENST00000544093 C11orf70Q9BRQ4 267 aa23.98■■□□□ 1.43
CHFR-222ENST00000544093 NUP58Q9BVL2 599 aa23.98■■□□□ 1.43
CHFR-222ENST00000544093 METTL5Q9NRN9 209 aaKnown RBP23.98■■□□□ 1.43
CHFR-222ENST00000544093 ERVW-1Q9UQF0 538 aa23.98■■□□□ 1.43
CHFR-222ENST00000544093 A0A1B0GTH6 734 aa23.97■■□□□ 1.43
CHFR-222ENST00000544093 TEX33O43247 280 aa23.97■■□□□ 1.43
CHFR-222ENST00000544093 ADCY5O95622 1261 aa23.97■■□□□ 1.43
CHFR-222ENST00000544093 SERPINC1P01008 464 aa23.97■■□□□ 1.43
CHFR-222ENST00000544093 SDC4P31431 198 aa23.97■■□□□ 1.43
CHFR-222ENST00000544093 CDH4P55283 916 aa23.97■■□□□ 1.43
CHFR-222ENST00000544093 SFSWAPQ12872 951 aaKnown RBP23.97■■□□□ 1.43
CHFR-222ENST00000544093 HNRNPA1L2Q32P51 320 aaKnown RBP23.97■■□□□ 1.43
CHFR-222ENST00000544093 GON4LQ3T8J9 2241 aa23.97■■□□□ 1.43
CHFR-222ENST00000544093 TTC31Q49AM3 519 aaPredicted RBP23.97■■□□□ 1.43
CHFR-222ENST00000544093 SYCP2LQ5T4T6 812 aa23.97■■□□□ 1.43
CHFR-222ENST00000544093 ARMCX6Q7L4S7 300 aa23.97■■□□□ 1.43
CHFR-222ENST00000544093 CADM4Q8NFZ8 388 aa23.97■■□□□ 1.43
CHFR-222ENST00000544093 IGSF8Q969P0 613 aa23.97■■□□□ 1.43
CHFR-222ENST00000544093 ZNF419Q96HQ0 510 aaPredicted RBP23.97■■□□□ 1.43
CHFR-222ENST00000544093 CFAP57Q96MR6 1250 aa23.97■■□□□ 1.43
CHFR-222ENST00000544093 HAPLN3Q96S86 360 aa23.97■■□□□ 1.43
CHFR-222ENST00000544093 ADAM33Q9BZ11 813 aa23.97■■□□□ 1.43
CHFR-222ENST00000544093 SIK2Q9H0K1 926 aa23.97■■□□□ 1.43
CHFR-222ENST00000544093 PRSS16Q9NQE7 514 aa23.97■■□□□ 1.43
CHFR-222ENST00000544093 SEPT11Q9NVA2 429 aaKnown RBP23.97■■□□□ 1.43
CHFR-222ENST00000544093 WSB2Q9NYS7 404 aaPredicted RBP23.97■■□□□ 1.43
CHFR-222ENST00000544093 PILRBQ9UKJ0 227 aa23.97■■□□□ 1.43
CHFR-222ENST00000544093 SCML1Q9UN30 329 aa23.97■■□□□ 1.43
CHFR-222ENST00000544093 DNAH14Q0VDD8 3507 aa23.97■■□□□ 1.43
CHFR-222ENST00000544093 PI4KAP42356 2102 aa23.96■■□□□ 1.43
CHFR-222ENST00000544093 ITIH6Q6UXX5 1313 aa23.96■■□□□ 1.43
CHFR-222ENST00000544093 TARSL2A2RTX5 802 aaKnown RBP23.96■■□□□ 1.43
CHFR-222ENST00000544093 GDF9O60383 454 aa23.96■■□□□ 1.43
CHFR-222ENST00000544093 RNASEH1O60930 286 aaKnown RBP23.96■■□□□ 1.43
CHFR-222ENST00000544093 ENDOD1O94919 500 aa23.96■■□□□ 1.43
CHFR-222ENST00000544093 PDGFRAP16234 1089 aa23.96■■□□□ 1.43
CHFR-222ENST00000544093 TFE3P19532 575 aaPredicted RBP23.96■■□□□ 1.43
CHFR-222ENST00000544093 VASPP50552 380 aaPredicted RBP23.96■■□□□ 1.43
CHFR-222ENST00000544093 C1QBPQ07021 282 aaKnown RBP23.96■■□□□ 1.43
CHFR-222ENST00000544093 IL31Q6EBC2 164 aa23.96■■□□□ 1.43
CHFR-222ENST00000544093 TOE1Q96GM8 510 aaKnown RBP23.96■■□□□ 1.43
CHFR-222ENST00000544093 MYO19Q96H55 970 aa23.96■■□□□ 1.43
CHFR-222ENST00000544093 MRGPRX3Q96LB0 322 aa23.96■■□□□ 1.43
CHFR-222ENST00000544093 PCDHB18PQ96TA0 734 aa23.96■■□□□ 1.43
CHFR-222ENST00000544093 NUSAP1Q9BXS6 441 aaKnown RBP23.96■■□□□ 1.43
CHFR-222ENST00000544093 EDEM3Q9BZQ6 932 aa23.96■■□□□ 1.43
CHFR-222ENST00000544093 PCED1AQ9H1Q7 454 aa23.96■■□□□ 1.43
CHFR-222ENST00000544093 SMOC1Q9H4F8 434 aa23.96■■□□□ 1.43
CHFR-222ENST00000544093 TBC1D30Q9Y2I9 924 aa23.96■■□□□ 1.43
CHFR-222ENST00000544093 EDDM13A0A1B0GTR0 161 aa23.95■■□□□ 1.42
CHFR-222ENST00000544093 DNTTP04053 509 aa23.95■■□□□ 1.42
CHFR-222ENST00000544093 KRT3P12035 628 aa23.95■■□□□ 1.42
CHFR-222ENST00000544093 PTPN9P43378 593 aa23.95■■□□□ 1.42
CHFR-222ENST00000544093 ARL13BQ3SXY8 428 aa23.95■■□□□ 1.42
CHFR-222ENST00000544093 WDR45BQ5MNZ6 344 aa23.95■■□□□ 1.42
CHFR-222ENST00000544093 ZNF776Q68DI1 518 aaPredicted RBP23.95■■□□□ 1.42
CHFR-222ENST00000544093 CXorf57Q6NSI4 855 aaKnown RBP23.95■■□□□ 1.42
CHFR-222ENST00000544093 TRNP1Q6NT89 227 aa23.95■■□□□ 1.42
CHFR-222ENST00000544093 SLC23A3Q6PIS1 610 aa23.95■■□□□ 1.42
CHFR-222ENST00000544093 LRSAM1Q6UWE0 723 aa23.95■■□□□ 1.42
CHFR-222ENST00000544093 STRADAQ7RTN6 431 aa23.95■■□□□ 1.42
CHFR-222ENST00000544093 CIR1Q86X95 450 aaPredicted RBP23.95■■□□□ 1.42
CHFR-222ENST00000544093 ZNF366Q8N895 744 aa23.95■■□□□ 1.42
CHFR-222ENST00000544093 C3orf20Q8ND61 904 aa23.95■■□□□ 1.42
CHFR-222ENST00000544093 HSPA12BQ96MM6 686 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms