RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 AK5Q9Y6K8 562 aa20.68■□□□□ 0.9
LPCAT3-211ENST00000543794 EDDM13A0A1B0GTR0 161 aa20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 TYW5A2RUC4 315 aaKnown RBP20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 TTC34A8MYJ7 566 aa20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 LTFP02788 710 aa20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 PRB1P04280 392 aa20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 HSP90AA1P07900 732 aaKnown RBP20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 CTSOP43234 321 aaPredicted RBP20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 ARRB1P49407 418 aaPredicted RBP20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 NXPH1P58417 271 aa20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 CNGA2Q16280 664 aa20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 MS4A13Q5J8X5 152 aa20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 PITRM1Q5JRX3 1037 aa20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 HES3Q5TGS1 186 aa20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 TCERG1LQ5VWI1 586 aa20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 MMS22LQ6ZRQ5 1243 aa20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 SND1Q7KZF4 910 aaKnown RBP eCLIP20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 CARNMT1Q8N4J0 409 aa20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 AADATQ8N5Z0 425 aa20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 SERAC1Q96JX3 654 aa20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 FCRL2Q96LA5 508 aaPredicted RBP20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 HSFY1Q96LI6 401 aa20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 SPATA32Q96LK8 384 aa20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 SLCO3A1Q9UIG8 710 aa20.67■□□□□ 0.9
LPCAT3-211ENST00000543794 PIK3R2O00459 728 aa20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 ATXN7O15265 892 aaPredicted RBP20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 ZIC2O95409 532 aaPredicted RBP20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 FYNP06241 537 aa20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 PAEPP09466 180 aa20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 C5AR1P21730 350 aa20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 TBXAS1P24557 533 aaPredicted RBP20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 ADPRHP54922 357 aa20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 ECT2LQ008S8 904 aa20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 BNIP3Q12983 259 aa20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 ILKQ13418 452 aa20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 CDH18Q13634 790 aa20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 SLC45A4Q5BKX6 768 aa20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 DCAF17Q5H9S7 520 aaPredicted RBP20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 CCDC117Q8IWD4 279 aaPredicted RBP20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 SMYD4Q8IYR2 804 aaPredicted RBP20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 CACTIN-AS1Q8N1I8 211 aa20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 LSM14AQ8ND56 463 aaKnown RBP20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 OR14C36Q8NHC7 312 aa20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 CLEC4CQ8WTT0 213 aa20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 PTPRN2Q92932 1015 aa20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 SLC39A13Q96H72 371 aa20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 ZSWIM1Q9BR11 485 aa20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 NUCKS1Q9H1E3 243 aaKnown RBP20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 TLR6Q9Y2C9 796 aa20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 RAI2Q9Y5P3 530 aa20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 ITIH6Q6UXX5 1313 aa20.66■□□□□ 0.9
LPCAT3-211ENST00000543794 FLNBO75369 2602 aaKnown RBP20.65■□□□□ 0.9
LPCAT3-211ENST00000543794 RRP8O43159 456 aaKnown RBP20.65■□□□□ 0.9
LPCAT3-211ENST00000543794 LATO43561 262 aa20.65■□□□□ 0.9
LPCAT3-211ENST00000543794 C1QL1O75973 258 aa20.65■□□□□ 0.9
LPCAT3-211ENST00000543794 LUC7L3O95232 432 aaKnown RBP20.65■□□□□ 0.9
LPCAT3-211ENST00000543794 LRMPQ12912 555 aa20.65■□□□□ 0.9
LPCAT3-211ENST00000543794 NNTQ13423 1086 aa20.65■□□□□ 0.9
LPCAT3-211ENST00000543794 DCAF6Q58WW2 860 aa20.65■□□□□ 0.9
LPCAT3-211ENST00000543794 SFMBT2Q5VUG0 894 aa20.65■□□□□ 0.9
LPCAT3-211ENST00000543794 TMEM270Q6UE05 265 aa20.65■□□□□ 0.9
LPCAT3-211ENST00000543794 KANSL1Q7Z3B3 1105 aa20.65■□□□□ 0.9
LPCAT3-211ENST00000543794 CFAP52Q8N1V2 620 aa20.65■□□□□ 0.9
LPCAT3-211ENST00000543794 STK40Q8N2I9 435 aa20.65■□□□□ 0.9
LPCAT3-211ENST00000543794 OXR1Q8N573 874 aa20.65■□□□□ 0.9
LPCAT3-211ENST00000543794 SNIP1Q8TAD8 396 aaKnown RBP20.65■□□□□ 0.9
LPCAT3-211ENST00000543794 KALRNO60229 2985 aa20.64■□□□□ 0.9
LPCAT3-211ENST00000543794 RNF225M0QZC1 329 aaPredicted RBP20.64■□□□□ 0.89
LPCAT3-211ENST00000543794 SLC16A3O15427 465 aaKnown RBP20.64■□□□□ 0.89
LPCAT3-211ENST00000543794 FBXO21O94952 628 aa20.64■□□□□ 0.89
LPCAT3-211ENST00000543794 MOCS3O95396 460 aa20.64■□□□□ 0.89
LPCAT3-211ENST00000543794 ADH1BP00325 375 aa20.64■□□□□ 0.89
LPCAT3-211ENST00000543794 CENPBP07199 599 aaPredicted RBP20.64■□□□□ 0.89
LPCAT3-211ENST00000543794 PSMD8P48556 350 aa20.64■□□□□ 0.89
LPCAT3-211ENST00000543794 FKBP3Q00688 224 aaKnown RBP20.64■□□□□ 0.89
LPCAT3-211ENST00000543794 HSCBQ8IWL3 235 aa20.64■□□□□ 0.89
LPCAT3-211ENST00000543794 MFSD2AQ8NA29 543 aa20.64■□□□□ 0.89
LPCAT3-211ENST00000543794 DQX1Q8TE96 717 aaKnown RBP20.64■□□□□ 0.89
LPCAT3-211ENST00000543794 FAM131CQ96AQ9 280 aa20.64■□□□□ 0.89
LPCAT3-211ENST00000543794 SERPINB11Q96P15 392 aa20.64■□□□□ 0.89
LPCAT3-211ENST00000543794 PLXNA2O75051 1894 aa20.64■□□□□ 0.89
LPCAT3-211ENST00000543794 PTPRQQ9UMZ3 2332 aa20.64■□□□□ 0.89
LPCAT3-211ENST00000543794 SETXQ7Z333 2677 aaKnown RBP20.63■□□□□ 0.89
LPCAT3-211ENST00000543794 TBC1D3DA0A087WVF3 549 aa20.63■□□□□ 0.89
LPCAT3-211ENST00000543794 TBC1D3IA0A087WXS9 549 aa20.63■□□□□ 0.89
LPCAT3-211ENST00000543794 TBC1D3EA0A087X179 549 aa20.63■□□□□ 0.89
LPCAT3-211ENST00000543794 TBC1D3KA0A087X1G2 549 aa20.63■□□□□ 0.89
LPCAT3-211ENST00000543794 TBC1D3FA6NER0 549 aaPredicted RBP20.63■□□□□ 0.89
LPCAT3-211ENST00000543794 TBC1D3LB9A6J9 549 aa20.63■□□□□ 0.89
LPCAT3-211ENST00000543794 ZNF202O95125 648 aa20.63■□□□□ 0.89
LPCAT3-211ENST00000543794 TBC1D3HP0C7X1 549 aa20.63■□□□□ 0.89
LPCAT3-211ENST00000543794 CKMT2P17540 419 aa20.63■□□□□ 0.89
LPCAT3-211ENST00000543794 PRCPP42785 496 aa20.63■□□□□ 0.89
LPCAT3-211ENST00000543794 KRT85P78386 507 aa20.63■□□□□ 0.89
LPCAT3-211ENST00000543794 ELAVL3Q14576 367 aaKnown RBP20.63■□□□□ 0.89
LPCAT3-211ENST00000543794 STILQ15468 1287 aa20.63■□□□□ 0.89
LPCAT3-211ENST00000543794 RNF219Q5W0B1 726 aaPredicted RBP20.63■□□□□ 0.89
LPCAT3-211ENST00000543794 TBC1D3GQ6DHY5 549 aa20.63■□□□□ 0.89
LPCAT3-211ENST00000543794 TBC1D3CQ6IPX1 549 aa20.63■□□□□ 0.89
LPCAT3-211ENST00000543794 NAPEPLDQ6IQ20 393 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms