RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 WFIKKN2Q8TEU8 576 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 TEKT4Q8WW24 435 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 MYEOVQ96EZ4 313 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 PDLIM2Q96JY6 352 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 ALS2CR12Q96Q35 445 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 PEBP4Q96S96 227 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 KCTD15Q96SI1 283 aaPredicted RBP6.5□□□□□ -1.37
LTBR-212ENST00000543542 SPON2Q9BUD6 331 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 C1QTNF1Q9BXJ1 281 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 CALN1Q9BXU9 219 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 MAK16Q9BXY0 300 aaKnown RBP6.5□□□□□ -1.37
LTBR-212ENST00000543542 MAGEB5Q9BZ81 275 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 LACRTQ9GZZ8 138 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 RBM12Q9NTZ6 932 aaKnown RBP6.5□□□□□ -1.37
LTBR-212ENST00000543542 KLHL11Q9NVR0 708 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 SPATA6Q9NWH7 488 aaPredicted RBP6.5□□□□□ -1.37
LTBR-212ENST00000543542 DDX56Q9NY93 547 aaKnown RBP6.5□□□□□ -1.37
LTBR-212ENST00000543542 DONSONQ9NYP3 566 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 PPARGC1AQ9UBK2 798 aaKnown RBP6.5□□□□□ -1.37
LTBR-212ENST00000543542 TRIM10Q9UDY6 481 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 DNAI1Q9UI46 699 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 SLC25A13Q9UJS0 675 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 VPS28Q9UK41 221 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 AMFRQ9UKV5 643 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 PLA2G4CQ9UP65 541 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 PPP2R2CQ9Y2T4 447 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 MTF2Q9Y483 593 aaPredicted RBP6.5□□□□□ -1.37
LTBR-212ENST00000543542 ALG6Q9Y672 507 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 DUSP10Q9Y6W6 482 aa6.5□□□□□ -1.37
LTBR-212ENST00000543542 LRRD1A4D1F6 860 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 DRGXA6NNA5 263 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 PRR33A8MZF0 331 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 I6L893 689 aaPredicted RBP6.49□□□□□ -1.37
LTBR-212ENST00000543542 ZBTB24O43167 697 aaPredicted RBP6.49□□□□□ -1.37
LTBR-212ENST00000543542 PI15O43692 258 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 PALMO75781 387 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 KLF8O95600 359 aaPredicted RBP6.49□□□□□ -1.37
LTBR-212ENST00000543542 CISD3P0C7P0 127 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 TCF4P15884 667 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 RHOQP17081 205 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 AOC1P19801 751 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 IL1R2P27930 398 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 HLA-FP30511 346 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 CD70P32970 193 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 HTR7P34969 479 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 ETFBP38117 255 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 NNMTP40261 264 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 CETN2P41208 172 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 CSKP41240 450 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 WASP42768 502 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 MAGEA9P43362 315 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 MAPKAPK2P49137 400 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 DNA2P51530 1060 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 IRAK1P51617 712 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 CLCN5P51795 746 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 ZNF135P52742 658 aaPredicted RBP6.49□□□□□ -1.37
LTBR-212ENST00000543542 HADHBP55084 474 aaKnown RBP6.49□□□□□ -1.37
LTBR-212ENST00000543542 TAS2R40P59535 323 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 NRG1Q02297 640 aaPredicted RBP6.49□□□□□ -1.37
LTBR-212ENST00000543542 SLC25A11Q02978 314 aaKnown RBP6.49□□□□□ -1.37
LTBR-212ENST00000543542 SLC12A1Q13621 1099 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 PDK2Q15119 407 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 TCEAL1Q15170 157 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 GEN1Q17RS7 908 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 GAB4Q2WGN9 574 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 ATP13A4Q4VNC1 1196 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 FSCBQ5H9T9 825 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 PITRM1Q5JRX3 1037 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 MBLAC2Q68D91 279 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 CWF19L1Q69YN2 538 aaKnown RBP6.49□□□□□ -1.37
LTBR-212ENST00000543542 TXNRD3NBQ6F5E7 133 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 C11orf63Q6NUN7 778 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 PEX26Q7Z412 305 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 SETD3Q86TU7 594 aaPredicted RBP6.49□□□□□ -1.37
LTBR-212ENST00000543542 CPNE8Q86YQ8 564 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 RFX6Q8HWS3 928 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 CCDC105Q8IYK2 499 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 CHPFQ8IZ52 775 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 SYNPOQ8N3V7 929 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 CCDC33Q8N5R6 958 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 RNF10Q8N5U6 811 aaKnown RBP6.49□□□□□ -1.37
LTBR-212ENST00000543542 UBL4BQ8N7F7 174 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 TPCN2Q8NHX9 752 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 WFDC5Q8TCV5 224 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 ACDQ96AP0 544 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 TRIM44Q96DX7 344 aaPredicted RBP6.49□□□□□ -1.37
LTBR-212ENST00000543542 OSBPL6Q9BZF3 934 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 GOLPH3Q9H4A6 298 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 FBRSL1Q9HCM7 1045 aaKnown RBP6.49□□□□□ -1.37
LTBR-212ENST00000543542 ATP13A1Q9HD20 1204 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 ZDHHC4Q9NPG8 344 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 SALL4Q9UJQ4 1053 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 CLEC4EQ9ULY5 219 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 HPCAL4Q9UM19 191 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 SLC8A2Q9UPR5 921 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 SLC27A6Q9Y2P4 619 aa6.49□□□□□ -1.37
LTBR-212ENST00000543542 A0A0C4DFX4 3053 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 TRIOO75962 3097 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 IGLV3-10A0A075B6K4 115 aa6.48□□□□□ -1.37
LTBR-212ENST00000543542 A0A0U1RQJ8 604 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms