RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 INSCQ1MX18 579 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 STOX1Q6ZVD7 989 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 BSNDQ8WZ55 320 aa19.73■□□□□ 0.75
HDAC4-215ENST00000543185 TRPV3Q8NET8 790 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 RPL14P50914 215 aaKnown RBP19.72■□□□□ 0.75
HDAC4-215ENST00000543185 CHPFQ8IZ52 775 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 SPPL2AQ8TCT8 520 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 TCP10LQ8TDR4 215 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 SKA1Q96BD8 255 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 SLC9A7Q96T83 725 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 KPNA5O15131 536 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 RAVER2Q9HCJ3 691 aaKnown RBP19.72■□□□□ 0.75
HDAC4-215ENST00000543185 ZNF222Q9UK12 451 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 ZNF12P17014 697 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 GLRBP48167 497 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 RPS6KA3P51812 740 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 TTLL6Q8N841 843 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 PNMA8BQ9ULN7 279 aaPredicted RBP19.72■□□□□ 0.75
HDAC4-215ENST00000543185 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.72■□□□□ 0.75
HDAC4-215ENST00000543185 ZW10O43264 779 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 SERPINA6P08185 405 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 KLK7P49862 253 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 PRKCEQ02156 737 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 ZNF177Q13360 481 aaPredicted RBP19.72■□□□□ 0.75
HDAC4-215ENST00000543185 ARHGAP15Q53QZ3 475 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 PYDC2Q56P42 97 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 POLD4Q9HCU8 107 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 RAD17O75943 681 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 TAF6P49848 677 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 EMC1Q8N766 993 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 TMC2Q8TDI7 906 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 PCDHGC5Q9Y5F6 944 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 SLIT1O75093 1534 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.72■□□□□ 0.75
HDAC4-215ENST00000543185 EGFRP00533 1210 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 PLIN5Q00G26 463 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 C11orf96Q7Z7L8 435 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 WRNIP1Q96S55 665 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 MTMR4Q9NYA4 1195 aa19.72■□□□□ 0.75
HDAC4-215ENST00000543185 ABHD2P08910 425 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 C10orf120Q5SQS8 335 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 ZNF549Q6P9A3 640 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 ERVK-10P10266 1014 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 DDR1Q08345 913 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 LPIN1Q14693 890 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 VN1R5Q7Z5H4 357 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 LDHDQ86WU2 507 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 MINDY2Q8NBR6 621 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 PSMA8Q8TAA3 256 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 PIWIL2Q8TC59 973 aaKnown RBP19.71■□□□□ 0.75
HDAC4-215ENST00000543185 RRN3P2A6NIE6 340 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 DENND5AQ6IQ26 1287 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 ACMSDQ8TDX5 336 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 ZCWPW1Q9H0M4 648 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 CYP3A43Q9HB55 503 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 CYP24A1Q07973 514 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 TUBA3EQ6PEY2 450 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 NT5DC4Q86YG4 428 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 NUDT12Q9BQG2 462 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 PCNAP12004 261 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 OXCT1P55809 520 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 TMEM121Q9BTD3 319 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 NCF1BA6NI72 391 aaPredicted RBP19.71■□□□□ 0.75
HDAC4-215ENST00000543185 NCF1CA8MVU1 366 aaPredicted RBP19.71■□□□□ 0.75
HDAC4-215ENST00000543185 GLI1P08151 1106 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 NCF1P14598 390 aaPredicted RBP19.71■□□□□ 0.75
HDAC4-215ENST00000543185 ERVK-24P63145 666 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 DDIT4Q9NX09 232 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 TMCC2O75069 709 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 AP1G2O75843 785 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 MYL9P24844 172 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 FBXW8Q8N3Y1 598 aa19.71■□□□□ 0.75
HDAC4-215ENST00000543185 KPNA6O60684 536 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 COPZ1P61923 177 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 LMBRD2Q68DH5 695 aaPredicted RBP19.7■□□□□ 0.74
HDAC4-215ENST00000543185 ENGASEQ8NFI3 743 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 PYDC1Q8WXC3 89 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 SMAD5Q99717 465 aaKnown RBP19.7■□□□□ 0.74
HDAC4-215ENST00000543185 ST3GAL5Q9UNP4 418 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 KCNH4Q9UQ05 1017 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 TBC1D30Q9Y2I9 924 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 CHD2O14647 1828 aaKnown RBP19.7■□□□□ 0.74
HDAC4-215ENST00000543185 IL22Q9GZX6 179 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 ADAM28Q9UKQ2 775 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 LDOC1O95751 146 aaPredicted RBP19.7■□□□□ 0.74
HDAC4-215ENST00000543185 QRFPRQ96P65 431 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 VAT1Q99536 393 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 CHKBQ9Y259 395 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 STAU1O95793 577 aaKnown RBP19.7■□□□□ 0.74
HDAC4-215ENST00000543185 PLEKP08567 350 aaPredicted RBP19.7■□□□□ 0.74
HDAC4-215ENST00000543185 EPB42P16452 691 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 DSG3P32926 999 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 NECAB2Q7Z6G3 386 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 KLHL32Q96NJ5 620 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 CDRT15Q96T59 188 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 CAPN6Q9Y6Q1 641 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 ANKRD26Q9UPS8 1709 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 H7C4K7 107 aa19.7■□□□□ 0.74
HDAC4-215ENST00000543185 IFRD1O00458 451 aaPredicted RBP19.7■□□□□ 0.74
HDAC4-215ENST00000543185 PROSCO94903 275 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms