RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 SLC44A4Q53GD3 710 aa21.41■■□□□ 1.02
OTUB1-211ENST00000543004 MPP7Q5T2T1 576 aa21.41■■□□□ 1.02
OTUB1-211ENST00000543004 MFN1Q8IWA4 741 aa21.41■■□□□ 1.02
OTUB1-211ENST00000543004 SFTPA1Q8IWL2 248 aa21.41■■□□□ 1.02
OTUB1-211ENST00000543004 PCDH19Q8TAB3 1148 aa21.41■■□□□ 1.02
OTUB1-211ENST00000543004 DNAJC17Q9NVM6 304 aaKnown RBP21.41■■□□□ 1.02
OTUB1-211ENST00000543004 DNAI1Q9UI46 699 aa21.41■■□□□ 1.02
OTUB1-211ENST00000543004 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.41■■□□□ 1.02
OTUB1-211ENST00000543004 TTC28Q96AY4 2481 aa21.41■■□□□ 1.02
OTUB1-211ENST00000543004 TYW5A2RUC4 315 aaKnown RBP21.4■■□□□ 1.02
OTUB1-211ENST00000543004 MIF4GDA9UHW6 222 aaKnown RBP21.4■■□□□ 1.02
OTUB1-211ENST00000543004 H0Y626 953 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 H3BRJ5 948 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 FANCGO15287 622 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 DAPK3O43293 454 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 PYGMP11217 842 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 KRT10P13645 584 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 ERCC2P18074 760 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 CTHP32929 405 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 CDH4P55283 916 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 PDK2Q15119 407 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 ANKRD20A8PQ5CZ79 823 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 CXorf57Q6NSI4 855 aaKnown RBP21.4■■□□□ 1.02
OTUB1-211ENST00000543004 HERPUD2Q9BSE4 406 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 ARHGEF4Q9NR80 690 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 ANTXRLA6NF34 631 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 ZRANB2O95218 330 aaKnown RBP eCLIP21.4■■□□□ 1.02
OTUB1-211ENST00000543004 ATP1A1P05023 1023 aaKnown RBP21.4■■□□□ 1.02
OTUB1-211ENST00000543004 RHOQP17081 205 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 HLA-FP30511 346 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 CD70P32970 193 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 RWDD2BP57060 319 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 KDSRQ06136 332 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 ADCY2Q08462 1091 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 RPS6KA1Q15418 735 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 TTC39BQ5VTQ0 682 aaPredicted RBP21.4■■□□□ 1.02
OTUB1-211ENST00000543004 SPOCD1Q6ZMY3 1216 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 CCDC50Q8IVM0 306 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 UBL4BQ8N7F7 174 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 EXD1Q8NHP7 514 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 FBXO10Q9UK96 956 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 CHD5Q8TDI0 1954 aa21.4■■□□□ 1.02
OTUB1-211ENST00000543004 KRBA1A5PL33 1030 aa21.39■■□□□ 1.01
OTUB1-211ENST00000543004 CLDN11O75508 207 aa21.39■■□□□ 1.01
OTUB1-211ENST00000543004 CISD3P0C7P0 127 aa21.39■■□□□ 1.01
OTUB1-211ENST00000543004 OR1E1P30953 314 aa21.39■■□□□ 1.01
OTUB1-211ENST00000543004 CDKN2BP42772 138 aa21.39■■□□□ 1.01
OTUB1-211ENST00000543004 HCAR3P49019 387 aa21.39■■□□□ 1.01
OTUB1-211ENST00000543004 CDH18Q13634 790 aa21.39■■□□□ 1.01
OTUB1-211ENST00000543004 ODF2Q5BJF6 829 aa21.39■■□□□ 1.01
OTUB1-211ENST00000543004 CHST9Q7L1S5 443 aa21.39■■□□□ 1.01
OTUB1-211ENST00000543004 MAP7D3Q8IWC1 876 aa21.39■■□□□ 1.01
OTUB1-211ENST00000543004 TP53INP2Q8IXH6 220 aa21.39■■□□□ 1.01
OTUB1-211ENST00000543004 PQLC3Q8N755 202 aa21.39■■□□□ 1.01
OTUB1-211ENST00000543004 RTL3Q8N8U3 475 aaKnown RBP21.39■■□□□ 1.01
OTUB1-211ENST00000543004 FAF2Q96CS3 445 aa21.39■■□□□ 1.01
OTUB1-211ENST00000543004 XPO6Q96QU8 1125 aaKnown RBP21.39■■□□□ 1.01
OTUB1-211ENST00000543004 ZNF670Q9BS34 389 aa21.39■■□□□ 1.01
OTUB1-211ENST00000543004 ABCB8Q9NUT2 735 aa21.39■■□□□ 1.01
OTUB1-211ENST00000543004 TMEM248Q9NWD8 314 aa21.39■■□□□ 1.01
OTUB1-211ENST00000543004 ATG2BQ96BY7 2078 aa21.39■■□□□ 1.01
OTUB1-211ENST00000543004 NYNRINQ9P2P1 1898 aaKnown RBP21.38■■□□□ 1.01
OTUB1-211ENST00000543004 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.38■■□□□ 1.01
OTUB1-211ENST00000543004 DCLK1O15075 740 aa21.38■■□□□ 1.01
OTUB1-211ENST00000543004 MZF1P28698 734 aaPredicted RBP21.38■■□□□ 1.01
OTUB1-211ENST00000543004 CXCR5P32302 372 aa21.38■■□□□ 1.01
OTUB1-211ENST00000543004 GALK1P51570 392 aa21.38■■□□□ 1.01
OTUB1-211ENST00000543004 LMAN2Q12907 356 aa21.38■■□□□ 1.01
OTUB1-211ENST00000543004 ZNF177Q13360 481 aaPredicted RBP21.38■■□□□ 1.01
OTUB1-211ENST00000543004 KAZNQ674X7 775 aa21.38■■□□□ 1.01
OTUB1-211ENST00000543004 TPRG1Q6ZUI0 275 aa21.38■■□□□ 1.01
OTUB1-211ENST00000543004 RCOR2Q8IZ40 523 aa21.38■■□□□ 1.01
OTUB1-211ENST00000543004 PHTF2Q8N3S3 785 aa21.38■■□□□ 1.01
OTUB1-211ENST00000543004 NPWQ8N729 165 aa21.38■■□□□ 1.01
OTUB1-211ENST00000543004 FIBINQ8TAL6 211 aa21.38■■□□□ 1.01
OTUB1-211ENST00000543004 LMLNQ96KR4 655 aa21.38■■□□□ 1.01
OTUB1-211ENST00000543004 RNF157Q96PX1 679 aa21.38■■□□□ 1.01
OTUB1-211ENST00000543004 NOL6Q9H6R4 1146 aaKnown RBP21.38■■□□□ 1.01
OTUB1-211ENST00000543004 CATSPERBQ9H7T0 1116 aa21.38■■□□□ 1.01
OTUB1-211ENST00000543004 JRKLQ9Y4A0 524 aa21.38■■□□□ 1.01
OTUB1-211ENST00000543004 A0A0D9SEW6 157 aa21.37■■□□□ 1.01
OTUB1-211ENST00000543004 FGF10O15520 208 aaPredicted RBP21.37■■□□□ 1.01
OTUB1-211ENST00000543004 DGKGP49619 791 aa21.37■■□□□ 1.01
OTUB1-211ENST00000543004 PON2Q15165 354 aa21.37■■□□□ 1.01
OTUB1-211ENST00000543004 MLF2Q15773 248 aaPredicted RBP21.37■■□□□ 1.01
OTUB1-211ENST00000543004 TAZQ16635 292 aa21.37■■□□□ 1.01
OTUB1-211ENST00000543004 GEN1Q17RS7 908 aa21.37■■□□□ 1.01
OTUB1-211ENST00000543004 UBALD2Q8IYN6 164 aa21.37■■□□□ 1.01
OTUB1-211ENST00000543004 CCDC33Q8N5R6 958 aa21.37■■□□□ 1.01
OTUB1-211ENST00000543004 CELF6Q96J87 481 aaKnown RBP21.37■■□□□ 1.01
OTUB1-211ENST00000543004 HEMGNQ9BXL5 484 aa21.37■■□□□ 1.01
OTUB1-211ENST00000543004 KLC2Q9H0B6 622 aa21.37■■□□□ 1.01
OTUB1-211ENST00000543004 ARHGEF3Q9NR81 526 aa21.37■■□□□ 1.01
OTUB1-211ENST00000543004 RCOR3Q9P2K3 495 aaPredicted RBP21.37■■□□□ 1.01
OTUB1-211ENST00000543004 DEC1Q9P2X7 70 aa21.37■■□□□ 1.01
OTUB1-211ENST00000543004 FBXL21Q9UKT6 434 aa21.37■■□□□ 1.01
OTUB1-211ENST00000543004 TBC1D30Q9Y2I9 924 aa21.37■■□□□ 1.01
OTUB1-211ENST00000543004 KCNK3O14649 394 aa21.37■■□□□ 1.01
OTUB1-211ENST00000543004 MAP3K6O95382 1288 aa21.37■■□□□ 1.01
OTUB1-211ENST00000543004 HTR7P34969 479 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms