RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 CLCN2P51788 898 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 TUBA1BP68363 451 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 GPSM2P81274 684 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 NSUN2Q08J23 767 aaKnown RBP eCLIP6.18□□□□□ -1.42
XRCC4-206ENST00000542685 TBX2Q13207 712 aaPredicted RBP6.18□□□□□ -1.42
XRCC4-206ENST00000542685 DYRK1AQ13627 763 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 TAF11Q15544 211 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 CAMK4Q16566 473 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 GSTA3Q16772 222 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 PTPROQ16827 1216 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 ACCSLQ4AC99 568 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 SLC44A4Q53GD3 710 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 ANKRD20A2Q5SQ80 823 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 ANKRD20A1Q5TYW2 823 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 GKAP1Q5VSY0 366 aaPredicted RBP6.18□□□□□ -1.42
XRCC4-206ENST00000542685 ANKRD20A3Q5VUR7 823 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 TBC1D9BQ66K14 1250 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 TUBA1AQ71U36 451 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 UNC5CLQ8IV45 518 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 EIF1ADQ8N9N8 165 aaKnown RBP6.18□□□□□ -1.42
XRCC4-206ENST00000542685 CNBD1Q8NA66 436 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 NEK9Q8TD19 979 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 DIS3LQ8TF46 1054 aaKnown RBP6.18□□□□□ -1.42
XRCC4-206ENST00000542685 CTNNBL1Q8WYA6 563 aaPredicted RBP6.18□□□□□ -1.42
XRCC4-206ENST00000542685 CCT6BQ92526 530 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 MAP4K1Q92918 833 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 RILPL2Q969X0 211 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 DMRTA2Q96SC8 542 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 VRK1Q99986 396 aaPredicted RBP6.18□□□□□ -1.42
XRCC4-206ENST00000542685 RTFDC1Q9BY42 306 aaPredicted RBP6.18□□□□□ -1.42
XRCC4-206ENST00000542685 USP44Q9H0E7 712 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 IL25Q9H293 177 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 TAOK3Q9H2K8 898 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 PARVBQ9HBI1 364 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 PREBQ9HCU5 417 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 ATP8A2Q9NTI2 1148 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 IFNKQ9P0W0 207 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 TSPYL4Q9UJ04 414 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 RABL2BQ9UNT1 228 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 NEU2Q9Y3R4 380 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 MROH7Q68CQ1 1323 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 MAP3K15Q6ZN16 1313 aa6.18□□□□□ -1.42
XRCC4-206ENST00000542685 DPPA5A6NC42 116 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 GMNCA6NCL1 334 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 MPPED1O15442 326 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 LARGE1O95461 756 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 RPLP2P05387 115 aaKnown RBP6.17□□□□□ -1.42
XRCC4-206ENST00000542685 PORP16435 677 aaPredicted RBP6.17□□□□□ -1.42
XRCC4-206ENST00000542685 NR1D1P20393 614 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 SP100P23497 879 aaPredicted RBP6.17□□□□□ -1.42
XRCC4-206ENST00000542685 SKIV2L2P42285 1042 aaKnown RBP6.17□□□□□ -1.42
XRCC4-206ENST00000542685 ANXA11P50995 505 aaKnown RBP6.17□□□□□ -1.42
XRCC4-206ENST00000542685 MAPK10P53779 464 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 CSE1LP55060 971 aaKnown RBP6.17□□□□□ -1.42
XRCC4-206ENST00000542685 EVA1CP58658 441 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 PIGFQ07326 219 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 BIRC3Q13489 604 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 NDUFA5Q16718 116 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 ME3Q16798 604 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 PTPN21Q16825 1174 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 TRIM71Q2Q1W2 868 aaKnown RBP6.17□□□□□ -1.42
XRCC4-206ENST00000542685 KIAA0895LQ68EN5 471 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 ADALQ6DHV7 355 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 SULT6B1Q6IMI4 303 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 HIBCHQ6NVY1 386 aaPredicted RBP6.17□□□□□ -1.42
XRCC4-206ENST00000542685 LRIG3Q6UXM1 1119 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 CCNI2Q6ZMN8 369 aaPredicted RBP6.17□□□□□ -1.42
XRCC4-206ENST00000542685 PEG10Q86TG7 708 aaKnown RBP6.17□□□□□ -1.42
XRCC4-206ENST00000542685 SLC15A3Q8IY34 581 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 ADGRG5Q8IZF4 528 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 FBXL16Q8N461 479 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 SCAIQ8N9R8 606 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 FBXO41Q8TF61 875 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 ATP8B4Q8TF62 1192 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 SNX19Q92543 992 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 ATP6V0A1Q93050 837 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 CENPTQ96BT3 561 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 RRP36Q96EU6 259 aaKnown RBP6.17□□□□□ -1.42
XRCC4-206ENST00000542685 ABHD8Q96I13 439 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 LRIG1Q96JA1 1093 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 SYNCQ9H7C4 482 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 IL20Q9NYY1 176 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 HESX1Q9UBX0 185 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 ARHGEF17Q96PE2 2063 aaPredicted RBP6.17□□□□□ -1.42
XRCC4-206ENST00000542685 UTYO14607 1347 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 KIF1AQ12756 1690 aa6.17□□□□□ -1.42
XRCC4-206ENST00000542685 A0A1B0GVL5 298 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 ANO9A1A5B4 782 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 HTR3EA5X5Y0 456 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 TRAPPC3O43617 180 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 ORC4O43929 436 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 DIAPH2O60879 1101 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 TBCAO75347 108 aaKnown RBP6.16□□□□□ -1.42
XRCC4-206ENST00000542685 ALDH1L1O75891 902 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 CHRM2P08172 466 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 CLTAP09496 248 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 RHOXF2BP0C7M4 288 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 RPS6KB1P23443 525 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 STAT6P42226 847 aa6.16□□□□□ -1.42
XRCC4-206ENST00000542685 PMS2P54278 862 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms