RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 MBD3L5A6NJ08 208 aaPredicted RBP3.6□□□□□ -1.83
USP28-210ENST00000542033 C16orf96A6NNT2 1141 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 RRHO14718 337 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 BCAR3O75815 825 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 PYGLP06737 847 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 CYP3A4P08684 503 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 PEPDP12955 493 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 AKR1A1P14550 325 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 ST6GAL1P15907 406 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 SFPQP23246 707 aaKnown RBP eCLIP3.6□□□□□ -1.83
USP28-210ENST00000542033 RPS6KB1P23443 525 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 ATP5F1P24539 256 aaPredicted RBP3.6□□□□□ -1.83
USP28-210ENST00000542033 SERPINA4P29622 427 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 PCP4P48539 62 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 PLCD1P51178 756 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 ZNF81P51508 661 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 ZNF84P51523 738 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 SLC12A2P55011 1212 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 SLC37A1P57057 533 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 SSBP2P81877 361 aaPredicted RBP3.6□□□□□ -1.83
USP28-210ENST00000542033 DMWDQ09019 674 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 STIM1Q13586 685 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 EFR3AQ14156 821 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 DAZAP2Q15038 168 aaPredicted RBP3.6□□□□□ -1.83
USP28-210ENST00000542033 SLC9C1Q4G0N8 1177 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 FBXO47Q5MNV8 452 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 JMJD6Q6NYC1 403 aaPredicted RBP3.6□□□□□ -1.83
USP28-210ENST00000542033 TMEM88Q6PEY1 159 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 SLC2A7Q6PXP3 512 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 RBM44Q6ZP01 1051 aaKnown RBP3.6□□□□□ -1.83
USP28-210ENST00000542033 RSRC2Q7L4I2 434 aaKnown RBP3.6□□□□□ -1.83
USP28-210ENST00000542033 RRAGAQ7L523 313 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 TFAP2DQ7Z6R9 452 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 SCAMP5Q8TAC9 235 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 STT3BQ8TCJ2 826 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 DENND1AQ8TEH3 1009 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 RPL36ALQ969Q0 106 aaKnown RBP3.6□□□□□ -1.83
USP28-210ENST00000542033 P2RY11Q96G91 374 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 HTATIP2Q9BUP3 242 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 TM2D2Q9BX73 214 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 C1QTNF7Q9BXJ2 289 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 PRSS22Q9GZN4 317 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 TAF1DQ9H5J8 278 aaPredicted RBP3.6□□□□□ -1.83
USP28-210ENST00000542033 WDR26Q9H7D7 661 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 SFXN1Q9H9B4 322 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 SEPSECSQ9HD40 501 aaKnown RBP3.6□□□□□ -1.83
USP28-210ENST00000542033 ERVK-5Q9HDB9 667 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 SAYSD1Q9NPB0 183 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 ITM2CQ9NQX7 267 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 TMEM98Q9Y2Y6 226 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 TNFRSF18Q9Y5U5 241 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 SPATA31A5Q5VU36 1347 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 EMSYQ7Z589 1322 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 SPATA31A7Q8IWB4 1347 aa3.6□□□□□ -1.83
USP28-210ENST00000542033 IPO5O00410 1097 aaKnown RBP3.59□□□□□ -1.83
USP28-210ENST00000542033 CNTN5O94779 1100 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 TFEBP19484 476 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 IDUAP35475 653 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 MMP13P45452 471 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 CPA2P48052 419 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 CDK7P50613 346 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 RCAN1P53805 252 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 PNLIPRP1P54315 467 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 FOXL2P58012 376 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 FAM3BP58499 235 aaPredicted RBP3.59□□□□□ -1.83
USP28-210ENST00000542033 RPS13P62277 151 aaKnown RBP3.59□□□□□ -1.83
USP28-210ENST00000542033 ZNF91Q05481 1191 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 ADCK5Q3MIX3 580 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 TTC22Q5TAA0 569 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 RFX6Q8HWS3 928 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 RHPN2Q8IUC4 686 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 OR6Y1Q8NGX8 325 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.59□□□□□ -1.83
USP28-210ENST00000542033 SPPL3Q8TCT6 385 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 GOLGA1Q92805 767 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 SEC62Q99442 399 aaKnown RBP3.59□□□□□ -1.83
USP28-210ENST00000542033 DDX23Q9BUQ8 820 aaKnown RBP3.59□□□□□ -1.83
USP28-210ENST00000542033 RASSF1Q9NS23 344 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 TMLHEQ9NVH6 421 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 TMEM51Q9NW97 253 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 RNF7Q9UBF6 113 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 SLC13A4Q9UKG4 626 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 SLC8A2Q9UPR5 921 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 BTBD3Q9Y2F9 522 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 CRYL1Q9Y2S2 319 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 ITIH6Q6UXX5 1313 aa3.59□□□□□ -1.83
USP28-210ENST00000542033 CYP3A7-CYP3A51PA0A087WV96 503 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 SLC22A23A1A5C7 686 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 AGAP5A6NIR3 686 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 H0Y3Z8 333 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 TCERG1O14776 1098 aaKnown RBP3.58□□□□□ -1.84
USP28-210ENST00000542033 TP73O15350 636 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 KRT38O76015 456 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 KAT7O95251 611 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 SGPL1O95470 568 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 LDHCP07864 332 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 ALDOCP09972 364 aaKnown RBP3.58□□□□□ -1.84
USP28-210ENST00000542033 RFPL3SP0C7P2 107 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 IGFBP2P18065 325 aa3.58□□□□□ -1.84
USP28-210ENST00000542033 TNFAIP3P21580 790 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms