RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 MRPL38Q96DV4 380 aaKnown RBP5.86□□□□□ -1.47
CPSF7-220ENST00000541963 CCDC51Q96ER9 411 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 CALML4Q96GE6 196 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 ZNF668Q96K58 619 aaPredicted RBP5.86□□□□□ -1.47
CPSF7-220ENST00000541963 IFT74Q96LB3 600 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 AK8Q96MA6 479 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 C17orf80Q9BSJ5 609 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 MRPL9Q9BYD2 267 aaKnown RBP5.86□□□□□ -1.47
CPSF7-220ENST00000541963 NFKBIZQ9BYH8 718 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 TMEM117Q9H0C3 514 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 C2orf40Q9H1Z8 148 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 ZSCAN16Q9H4T2 348 aaPredicted RBP5.86□□□□□ -1.47
CPSF7-220ENST00000541963 MSL2Q9HCI7 577 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 UBN1Q9NPG3 1134 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 AJAP1Q9UKB5 411 aaPredicted RBP5.86□□□□□ -1.47
CPSF7-220ENST00000541963 PIN4Q9Y237 131 aaKnown RBP5.86□□□□□ -1.47
CPSF7-220ENST00000541963 PCDHA3Q9Y5H8 950 aa5.86□□□□□ -1.47
CPSF7-220ENST00000541963 RANBP2P49792 3224 aaKnown RBP5.86□□□□□ -1.47
CPSF7-220ENST00000541963 PHLPP2Q6ZVD8 1323 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 A0A1W2PRX2 142 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 ANO9A1A5B4 782 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 CFAP69A5D8W1 941 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 VWA3AA6NCI4 1184 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 USO1O60763 962 aaKnown RBP5.85□□□□□ -1.47
CPSF7-220ENST00000541963 ZNF623O75123 536 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 PEX14O75381 377 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 CSDE1O75534 798 aaKnown RBP5.85□□□□□ -1.47
CPSF7-220ENST00000541963 LAG3P18627 525 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 SYT1P21579 422 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 FGFR4P22455 802 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 CASRP41180 1078 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 UBA7P41226 1012 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 SLC6A9P48067 706 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 PTENP60484 403 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 MRPS5P82675 430 aaKnown RBP5.85□□□□□ -1.47
CPSF7-220ENST00000541963 KRT17Q04695 432 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 HGFACQ04756 655 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 UBE3AQ05086 875 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 ZRSR1Q15695 479 aaKnown RBP5.85□□□□□ -1.47
CPSF7-220ENST00000541963 TBR1Q16650 682 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 RNF151Q2KHN1 245 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 RNF220Q5VTB9 566 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 NOTUMQ6P988 496 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 GLB1LQ6UWU2 654 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 MAEAQ7L5Y9 396 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 APBB1IPQ7Z5R6 666 aaPredicted RBP5.85□□□□□ -1.47
CPSF7-220ENST00000541963 LRRC43Q8N309 656 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 FAM156AQ8NDB6 213 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 RASSF8Q8NHQ8 419 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 DEPTORQ8TB45 409 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 MDM1Q8TC05 714 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 URGCPQ8TCY9 931 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 GDPD5Q8WTR4 605 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 CASKIN2Q8WXE0 1202 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 STON2Q8WXE9 905 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 KIFAP3Q92845 792 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 TCF25Q9BQ70 676 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 TIPINQ9BVW5 301 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 B3GNT5Q9BYG0 378 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 TRIM6Q9C030 488 aaPredicted RBP5.85□□□□□ -1.47
CPSF7-220ENST00000541963 ZNF700Q9H0M5 742 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 POLR3FQ9H1D9 316 aaPredicted RBP5.85□□□□□ -1.47
CPSF7-220ENST00000541963 BHMT2Q9H2M3 363 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 SARS2Q9NP81 518 aaKnown RBP5.85□□□□□ -1.47
CPSF7-220ENST00000541963 AGPAT5Q9NUQ2 364 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 DDX19AQ9NUU7 478 aaKnown RBP5.85□□□□□ -1.47
CPSF7-220ENST00000541963 PRMT7Q9NVM4 692 aaPredicted RBP5.85□□□□□ -1.47
CPSF7-220ENST00000541963 THEGQ9P2T0 379 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 FEZ2Q9UHY8 353 aaPredicted RBP5.85□□□□□ -1.47
CPSF7-220ENST00000541963 SIK3Q9Y2K2 1263 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 PTPRSQ13332 1948 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 SIP14410 1827 aa5.85□□□□□ -1.47
CPSF7-220ENST00000541963 RALGAPA2Q2PPJ7 1873 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 CNTNAP2Q9UHC6 1331 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 LAMA3Q16787 3333 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 A0A087WWV3 80 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 UBE2QL1A1L167 161 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 FSD2A1L4K1 749 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 EPOPA6NHQ4 379 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 LRRIQ4A6NIV6 560 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 STX6O43752 255 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 NOBOXO60393 691 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 LPXNO60711 386 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 FTH1P19P0C7X4 201 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 RAP2AP10114 183 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 GLRA2P23416 452 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 PPM1AP35813 382 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 LONP1P36776 959 aaKnown RBP5.84□□□□□ -1.47
CPSF7-220ENST00000541963 NAMPTP43490 491 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 ALDH7A1P49419 539 aaKnown RBP5.84□□□□□ -1.47
CPSF7-220ENST00000541963 GZMKP49863 264 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 EFNA5P52803 228 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 PPP2CBP62714 309 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 PPP2CAP67775 309 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 RNASELQ05823 741 aaKnown RBP5.84□□□□□ -1.47
CPSF7-220ENST00000541963 TARDBPQ13148 414 aaKnown RBP eCLIP5.84□□□□□ -1.47
CPSF7-220ENST00000541963 SP140Q13342 867 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 CAPSQ13938 189 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 ACAP1Q15027 740 aa5.84□□□□□ -1.47
CPSF7-220ENST00000541963 ZNF124Q15973 351 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms