RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 ERMARDQ5T6L9 678 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 VSTM1Q6UX27 236 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 TADA2BQ86TJ2 420 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 RCOR2Q8IZ40 523 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 MMGT1Q8N4V1 131 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 PQLC3Q8N755 202 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 PCDH19Q8TAB3 1148 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 SPATA18Q8TC71 538 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 ACTL9Q8TC94 416 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 SPPL2BQ8TCT7 592 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 GDPD5Q8WTR4 605 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 CASKIN2Q8WXE0 1202 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 NT5C3BQ969T7 300 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 WBP2Q969T9 261 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 FUBP3Q96I24 572 aaKnown RBP eCLIP7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 ZNF512Q96ME7 567 aaPredicted RBP7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 PWWP2AQ96N64 755 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 SLC22A12Q96S37 553 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 CEP41Q9BYV8 373 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 DCLK3Q9C098 648 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 VPS18Q9P253 973 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 FAM153AQ9UHL3 310 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 FZD10Q9ULW2 581 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 NYNRINQ9P2P1 1898 aaKnown RBP7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 TRDMT1O14717 391 aaKnown RBP7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 CCL16O15467 120 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 PHF2O75151 1096 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 ABLIM3O94929 683 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 RARGP13631 454 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 MCM3P25205 808 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 KLRC2P26717 231 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 RDXP35241 583 aaKnown RBP7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 BMPR1AP36894 532 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 COILP38432 576 aaPredicted RBP7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 KCNQ1P51787 676 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 CYP4F8P98187 520 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 SLC10A2Q12908 348 aaPredicted RBP7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 ANKRD20A8PQ5CZ79 823 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 POLNQ7Z5Q5 900 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 ADGRD2Q7Z7M1 963 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 CIR1Q86X95 450 aaPredicted RBP7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 ALDH16A1Q8IZ83 802 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 PLD5Q8N7P1 536 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 CMASQ8NFW8 434 aaPredicted RBP7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 DEPDC1BQ8WUY9 529 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 MYEOVQ96EZ4 313 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 RBM41Q96IZ5 413 aaKnown RBP7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 C8orf48Q96LL4 319 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 SLC9A7Q96T83 725 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 APOL5Q9BWW9 433 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 SMG9Q9H0W8 520 aaKnown RBP7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 GKN1Q9NS71 199 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 DNAJC17Q9NVM6 304 aaKnown RBP7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 SMPD4Q9NXE4 827 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 STIM2Q9P246 746 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 RASAL2Q9UJF2 1139 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 TTC7AQ9ULT0 858 aaPredicted RBP7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 STAP1Q9ULZ2 295 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 NFU1Q9UMS0 254 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 SNX24Q9Y343 169 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 INSL5Q9Y5Q6 135 aa7.99□□□□□ -1.13
AC005840.3-201ENST00000541888 C2orf16Q68DN1 1984 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 DOCK4Q8N1I0 1966 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 GOLGA6L10A0A0M3HER8 536 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 GOLGA6L7A0A1B0GV03 622 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 C2orf71A6NGG8 1288 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 H0YGN5 161 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 IRAK2O43187 625 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 IFNB1P01574 187 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 CTSAP10619 480 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 EPCAMP16422 314 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 HMGA1P17096 107 aaKnown RBP7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 PAX3P23760 479 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 PPM1AP35813 382 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 MAGEA11P43364 429 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 GYS2P54840 703 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 LRRC38Q5VT99 294 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 STRADAQ7RTN6 431 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 BNIPLQ7Z465 357 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 JAMLQ86YT9 394 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 SPPL3Q8TCT6 385 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 RNF139Q8WU17 664 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 ARNTL2Q8WYA1 636 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 BHMTQ93088 406 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 CSPG4P5Q96PW8 444 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 PBX4Q9BYU1 374 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 UBE2OQ9C0C9 1292 aaKnown RBP7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 RNF38Q9H0F5 515 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 NKX2-4Q9H2Z4 354 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 WDCPQ9H6R7 721 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 TRPC7Q9HCX4 862 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 ABCC13Q9NSE7 274 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 DDX56Q9NY93 547 aaKnown RBP7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 MPP6Q9NZW5 540 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 AFF4Q9UHB7 1163 aaKnown RBP7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 SCML2Q9UQR0 700 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 BACE2Q9Y5Z0 518 aa7.98□□□□□ -1.13
AC005840.3-201ENST00000541888 PRRC2BQ5JSZ5 2229 aaKnown RBP7.97□□□□□ -1.13
AC005840.3-201ENST00000541888 LIASO43766 372 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms