RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 ASB3Q9Y575 518 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 PPFIA2O75334 1257 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 IGLV3-27P01718 113 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 EZRP15311 586 aaKnown RBP8.93□□□□□ -0.98
THBS3-210ENST00000541576 NR1D1P20393 614 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 SERPINB6P35237 376 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 CHKAP35790 457 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 MLLT6P55198 1093 aaPredicted RBP8.93□□□□□ -0.98
THBS3-210ENST00000541576 CAV1Q03135 178 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 PDK1Q15118 436 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 ARTNQ5T4W7 220 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 PIK3R6Q5UE93 754 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 UHMK1Q8TAS1 419 aaKnown RBP8.93□□□□□ -0.98
THBS3-210ENST00000541576 QKIQ96PU8 341 aaKnown RBP eCLIP8.93□□□□□ -0.98
THBS3-210ENST00000541576 ATP8A1Q9Y2Q0 1164 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 HACD1B0YJ81 288 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 DNALI1O14645 258 aaPredicted RBP8.93□□□□□ -0.98
THBS3-210ENST00000541576 PPP1R12AO14974 1030 aaPredicted RBP8.93□□□□□ -0.98
THBS3-210ENST00000541576 GRM6O15303 877 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 COCHO43405 550 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 TUBP50607 506 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 NRG1Q02297 640 aaPredicted RBP8.93□□□□□ -0.98
THBS3-210ENST00000541576 SNCBQ16143 134 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 ACCSLQ4AC99 568 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 MANEALQ5VSG8 457 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 NUGGCQ68CJ6 796 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 HEATR6Q6AI08 1181 aaKnown RBP8.93□□□□□ -0.98
THBS3-210ENST00000541576 HIBCHQ6NVY1 386 aaPredicted RBP8.93□□□□□ -0.98
THBS3-210ENST00000541576 NLRP14Q86W24 1093 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 TFB1MQ8WVM0 346 aaKnown RBP8.93□□□□□ -0.98
THBS3-210ENST00000541576 MIEF2Q96C03 454 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 RTP4Q96DX8 246 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 TGS1Q96RS0 853 aaKnown RBP8.93□□□□□ -0.98
THBS3-210ENST00000541576 EPB41L4BQ9H329 900 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 CATSPERBQ9H7T0 1116 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 TPX2Q9ULW0 747 aaKnown RBP8.93□□□□□ -0.98
THBS3-210ENST00000541576 NEU3Q9UQ49 428 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 RAD54BQ9Y620 910 aa8.93□□□□□ -0.98
THBS3-210ENST00000541576 NUP205Q92621 2012 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 GOLGA6L10A6NI86 522 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 GOLGA8KD6RF30 607 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 E9PAM4 449 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 NDC80O14777 642 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 FGF10O15520 208 aaPredicted RBP8.92□□□□□ -0.98
THBS3-210ENST00000541576 HOXC13P31276 330 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 MTA1Q13330 715 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 PABPC1LQ4VXU2 614 aaKnown RBP8.92□□□□□ -0.98
THBS3-210ENST00000541576 MS4A13Q5J8X5 152 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 MICALCLQ6ZW33 695 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 ELMOD1Q8N336 334 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 SAMD11Q96NU1 681 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 LGMNQ99538 433 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 SEMA4AQ9H3S1 761 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 ZNF334Q9HCZ1 680 aaPredicted RBP8.92□□□□□ -0.98
THBS3-210ENST00000541576 DNAJC17Q9NVM6 304 aaKnown RBP8.92□□□□□ -0.98
THBS3-210ENST00000541576 L3MBTL1Q9Y468 752 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 TLDC2A0PJX2 215 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 IRS1P35568 1242 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 KCNQ1P51787 676 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 CLCN4P51793 760 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 COG7P83436 770 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 AUHQ13825 339 aaKnown RBP8.92□□□□□ -0.98
THBS3-210ENST00000541576 CAMK1Q14012 370 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 ACBD5Q5T8D3 534 aaPredicted RBP8.92□□□□□ -0.98
THBS3-210ENST00000541576 COL13A1Q5TAT6 717 aaPredicted RBP8.92□□□□□ -0.98
THBS3-210ENST00000541576 ALS2CLQ60I27 953 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 CPLX4Q7Z7G2 160 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 C14orf80Q86SX3 495 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 TMEM150AQ86TG1 271 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 CCDC25Q86WR0 208 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 NPWQ8N729 165 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 CCNYQ8ND76 341 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 FERMT1Q9BQL6 677 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 PRDM12Q9H4Q4 367 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 VANGL2Q9ULK5 521 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 PCDHA11Q9Y5I1 949 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 C2orf78A6NCI8 922 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 H0YGN5 161 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 NCAM2O15394 837 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 OAS1P00973 400 aaKnown RBP8.92□□□□□ -0.98
THBS3-210ENST00000541576 F11P03951 625 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 MX2P20592 715 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 GAD2Q05329 585 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 AP1B1Q10567 949 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 MORF4L2Q15014 288 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 RNASEH2BQ5TBB1 312 aaKnown RBP8.92□□□□□ -0.98
THBS3-210ENST00000541576 ANKRD22Q5VYY1 191 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 PCGF5Q86SE9 256 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 TAX1BP1Q86VP1 789 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 UBLCP1Q8WVY7 318 aaPredicted RBP8.92□□□□□ -0.98
THBS3-210ENST00000541576 HTR3CQ8WXA8 447 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 FAM167BQ9BTA0 163 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 IL21Q9HBE4 155 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 PAK5Q9P286 719 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 NFS1Q9Y697 457 aa8.92□□□□□ -0.98
THBS3-210ENST00000541576 GBF1Q92538 1859 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 TCRBV7S3A2A0A539 114 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 VAV1P15498 845 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 GABRR2P28476 465 aa8.91□□□□□ -0.98
THBS3-210ENST00000541576 HARS2P49590 506 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms