RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 ZBTB33Q86T24 672 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 NUDCD3Q8IVD9 361 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 ULK2Q8IYT8 1036 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 TMEM161BQ8NDZ6 487 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 PPP1R14CQ8TAE6 165 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 DCAKDQ8WVC6 231 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 DLG3Q92796 817 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 CCDC127Q96BQ5 260 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 BTBD6Q96KE9 485 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 MIPEPQ99797 713 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 NAT9Q9BTE0 207 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 SMOC2Q9H3U7 446 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 S100A14Q9HCY8 104 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 PPARGC1AQ9UBK2 798 aaKnown RBP10.69□□□□□ -0.7
CHFR-219ENST00000541341 DNPEPQ9ULA0 475 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 PRPF19Q9UMS4 504 aaKnown RBP10.69□□□□□ -0.7
CHFR-219ENST00000541341 PCDHGC3Q9UN70 934 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.69□□□□□ -0.7
CHFR-219ENST00000541341 AKT3Q9Y243 479 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 TBC1D30Q9Y2I9 924 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 R3HDM2Q9Y2K5 976 aaKnown RBP10.69□□□□□ -0.7
CHFR-219ENST00000541341 PCDHB4Q9Y5E5 795 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 SQORQ9Y6N5 450 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 ANK1P16157 1881 aa10.69□□□□□ -0.7
CHFR-219ENST00000541341 MYO15AQ9UKN7 3530 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 ZNF487B1APH4 448 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 CASQ2O14958 399 aaPredicted RBP10.68□□□□□ -0.7
CHFR-219ENST00000541341 DENRO43583 198 aaKnown RBP10.68□□□□□ -0.7
CHFR-219ENST00000541341 GPR32O75388 356 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 TNFAIP8O95379 198 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 CDH5P33151 784 aaPredicted RBP10.68□□□□□ -0.7
CHFR-219ENST00000541341 CRHR1P34998 444 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 CCNFP41002 786 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 CDKN2BP42772 138 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 NAMPTP43490 491 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 CHN2P52757 468 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 NLRP11P59045 1033 aaKnown RBP10.68□□□□□ -0.7
CHFR-219ENST00000541341 TMPRSS15P98073 1019 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 STX3Q13277 289 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 CAPSQ13938 189 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 TAZQ16635 292 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 CNPY1Q3B7I2 92 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 MMEL1Q495T6 779 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 CFAP157Q5JU67 520 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 RARS2Q5T160 578 aaKnown RBP10.68□□□□□ -0.7
CHFR-219ENST00000541341 B3GNT6Q6ZMB0 384 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 SLC24A5Q71RS6 500 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 ZNF410Q86VK4 478 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 SPATA24Q86W54 205 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 PDSS2Q86YH6 399 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 RHPN2Q8IUC4 686 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 FBXO36Q8NEA4 188 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 TAS1R2Q8TE23 839 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 MZB1Q8WU39 189 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 PRPF31Q8WWY3 499 aaKnown RBP10.68□□□□□ -0.7
CHFR-219ENST00000541341 AUTS2Q8WXX7 1259 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 CDKL2Q92772 493 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 TMEM143Q96AN5 459 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 RILPQ96NA2 401 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 EPAS1Q99814 870 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 TCF25Q9BQ70 676 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 PHF7Q9BWX1 381 aaPredicted RBP10.68□□□□□ -0.7
CHFR-219ENST00000541341 MRPS26Q9BYN8 205 aaKnown RBP10.68□□□□□ -0.7
CHFR-219ENST00000541341 DNAI2Q9GZS0 605 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 KLC2Q9H0B6 622 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 POLR3FQ9H1D9 316 aaPredicted RBP10.68□□□□□ -0.7
CHFR-219ENST00000541341 GPRC5CQ9NQ84 441 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 RNF19AQ9NV58 838 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 SIRPGQ9P1W8 387 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 CNTN3Q9P232 1028 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 DCDC2Q9UHG0 476 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 XPO7Q9UIA9 1087 aaKnown RBP10.68□□□□□ -0.7
CHFR-219ENST00000541341 CNOT11Q9UKZ1 510 aaKnown RBP10.68□□□□□ -0.7
CHFR-219ENST00000541341 PLLPQ9Y342 182 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 MAD1L1Q9Y6D9 718 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 STYXL1Q9Y6J8 313 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 CITO14578 2027 aa10.68□□□□□ -0.7
CHFR-219ENST00000541341 H3BNX3 289 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 H3BRJ5 948 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 HGSO14964 777 aaPredicted RBP10.67□□□□□ -0.7
CHFR-219ENST00000541341 HNRNPDLO14979 420 aaKnown RBP10.67□□□□□ -0.7
CHFR-219ENST00000541341 GPR182O15218 404 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 SLC16A4O15374 487 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 IFNB1P01574 187 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 PIGRP01833 764 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 TNNI1P19237 187 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 MAGEA8P43361 318 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 NPTX2P47972 431 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 ACADVLP49748 655 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 LIG4P49917 911 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 COPAP53621 1224 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 CRYBB1P53674 252 aaPredicted RBP10.67□□□□□ -0.7
CHFR-219ENST00000541341 LAMTOR4Q0VGL1 99 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 TCF15Q12870 199 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 WDR72Q3MJ13 1102 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 ANKRD20A4Q4UJ75 823 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 ANKRD54Q6NXT1 300 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 SYCE2Q6PIF2 218 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 RINLQ6ZS11 566 aa10.67□□□□□ -0.7
CHFR-219ENST00000541341 RIPOR1Q6ZS17 1223 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms