RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 CLEC4FQ8N1N0 589 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 CXorf40AQ8TE69 158 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 PANX3Q96QZ0 392 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 B4GALT4O60513 344 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 MLNP12872 115 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 PEX19P40855 299 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 DUSP4Q13115 394 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 PRKAA1Q13131 559 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 MED21Q13503 144 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 RMND5AQ9H871 391 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 CNGB3Q9NQW8 809 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 PHTF1Q9UMS5 762 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 SHPRHQ149N8 1683 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 SEC24CP53992 1094 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 FMO1Q01740 532 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 DPYSL3Q14195 570 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 MTSS1LQ765P7 747 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 PHF13Q86YI8 300 aaPredicted RBP14.4□□□□□ -0.1
USP3-204ENST00000540797 ZNF555Q8NEP9 628 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 BSNDQ8WZ55 320 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 ACOX2Q99424 681 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 BBS2Q9BXC9 721 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 PLIN4Q96Q06 1357 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 RAD51BO15315 384 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 SEL1L3Q68CR1 1132 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 HORMAD1Q86X24 394 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 LNX1Q8TBB1 728 aaPredicted RBP14.4□□□□□ -0.1
USP3-204ENST00000540797 MCOLN3Q8TDD5 553 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 PLEKHA8Q96JA3 519 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 C10orf88Q9H8K7 445 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 FAM50BQ9Y247 325 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 LTN1O94822 1766 aa14.4□□□□□ -0.1
USP3-204ENST00000540797 ZW10O43264 779 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 ZNF862O60290 1169 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 MAPK8P45983 427 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 RPL21P46778 160 aaKnown RBP14.39□□□□□ -0.11
USP3-204ENST00000540797 MON1AQ86VX9 555 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 DACH2Q96NX9 599 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 MAN1C1Q9NR34 630 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 C1QTNF3-AMACRE9PGA6 284 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 TSPAN1O60635 241 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 NDUFS2O75306 463 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 RPN2P04844 631 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 CHI3L1P36222 383 aaPredicted RBP14.39□□□□□ -0.11
USP3-204ENST00000540797 ARL2P36404 184 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 COL9A3Q14050 684 aaPredicted RBP14.39□□□□□ -0.11
USP3-204ENST00000540797 DMC1Q14565 340 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 LRRC38Q5VT99 294 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 NSL1Q96IY1 281 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 SEMA4AQ9H3S1 761 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 SFMBT1Q9UHJ3 866 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 ROBO1Q9Y6N7 1651 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 DAB1O75553 588 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 FAM107AO95990 144 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 NOMO3P69849 1222 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 NPNTQ6UXI9 565 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 ZBTB10Q96DT7 871 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 ZFP42Q96MM3 310 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 CPNE1Q99829 537 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 TM6SF2Q9BZW4 377 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 PDZD7Q9H5P4 517 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 CHST7Q9NS84 486 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 MYO1CO00159 1063 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 HSPA1AP0DMV8 641 aaKnown RBP14.39□□□□□ -0.11
USP3-204ENST00000540797 HSPA1BP0DMV9 641 aaKnown RBP14.39□□□□□ -0.11
USP3-204ENST00000540797 CRABP2P29373 138 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 CD86P42081 329 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 DTX3LQ8TDB6 740 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 FAM84AQ96KN4 292 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 GAS2L1Q99501 681 aaPredicted RBP14.39□□□□□ -0.11
USP3-204ENST00000540797 DNAJC16Q9Y2G8 782 aa14.39□□□□□ -0.11
USP3-204ENST00000540797 BMP6P22004 513 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 GRK2P25098 689 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 MATKP42679 507 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 CPA2P48052 419 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 PGS1Q32NB8 556 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 TRAPPC5Q8IUR0 188 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 PARP9Q8IXQ6 854 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 CASP10Q92851 521 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 MAGEB10Q96LZ2 347 aaPredicted RBP14.38□□□□□ -0.11
USP3-204ENST00000540797 DHX33Q9H6R0 707 aaKnown RBP14.38□□□□□ -0.11
USP3-204ENST00000540797 NMRAL1Q9HBL8 299 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.38□□□□□ -0.11
USP3-204ENST00000540797 SAE1Q9UBE0 346 aaPredicted RBP14.38□□□□□ -0.11
USP3-204ENST00000540797 SLIT2O94813 1529 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 CTSEP14091 401 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 FMO4P31512 558 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 COPAP53621 1224 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 FUT11Q495W5 492 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 PSTKQ8IV42 348 aaKnown RBP14.38□□□□□ -0.11
USP3-204ENST00000540797 MAB21L3Q8N8X9 362 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 PHF21BQ96EK2 531 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 MLPHQ9BV36 600 aaPredicted RBP14.38□□□□□ -0.11
USP3-204ENST00000540797 ETNK2Q9NVF9 386 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 ZNF214Q9UL59 606 aaPredicted RBP14.38□□□□□ -0.11
USP3-204ENST00000540797 A0A0A0MRY4 1105 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 FGF19O95750 216 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 GNRH1P01148 92 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 KRT6AP02538 564 aa14.38□□□□□ -0.11
USP3-204ENST00000540797 KRT6BP04259 564 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms