RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 BUB1O43683 1085 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 BUB1BO60566 1050 aaPredicted RBP15.95■□□□□ 0.14
DDB1-218ENST00000540784 ATG13O75143 517 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 MOCS3O95396 460 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 KRT7P08729 469 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 PABPC1P11940 636 aaKnown RBP15.95■□□□□ 0.14
DDB1-218ENST00000540784 EPHB2P29323 1055 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 OR1E1P30953 314 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 CD70P32970 193 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 HTR7P34969 479 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 ZNF135P52742 658 aaPredicted RBP15.95■□□□□ 0.14
DDB1-218ENST00000540784 SEC13P55735 322 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 MRPS21P82921 87 aaKnown RBP15.95■□□□□ 0.14
DDB1-218ENST00000540784 SLC25A11Q02978 314 aaKnown RBP15.95■□□□□ 0.14
DDB1-218ENST00000540784 LMAN2Q12907 356 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 SLC12A1Q13621 1099 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 E2F5Q15329 346 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 IFI16Q16666 785 aaKnown RBP15.95■□□□□ 0.14
DDB1-218ENST00000540784 CA9Q16790 459 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 SMTNL2Q2TAL5 461 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 C2orf27AQ580R0 203 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 PPP6R3Q5H9R7 873 aaPredicted RBP15.95■□□□□ 0.14
DDB1-218ENST00000540784 ARTNQ5T4W7 220 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 EMC10Q5UCC4 262 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 MANEALQ5VSG8 457 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 CYP4V2Q6ZWL3 525 aaPredicted RBP15.95■□□□□ 0.14
DDB1-218ENST00000540784 TFAP2DQ7Z6R9 452 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 KIAA0907Q7Z7F0 614 aaPredicted RBP15.95■□□□□ 0.14
DDB1-218ENST00000540784 CPNE8Q86YQ8 564 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 AHI1Q8N157 1196 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.95■□□□□ 0.14
DDB1-218ENST00000540784 TMEM105Q8N8V8 129 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 WFDC5Q8TCV5 224 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 UCMAQ8WVF2 138 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 LMLNQ96KR4 655 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 LRFN3Q9BTN0 628 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 ELOVL2Q9NXB9 296 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 SALL4Q9UJQ4 1053 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 TBC1D30Q9Y2I9 924 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 ALG6Q9Y672 507 aa15.95■□□□□ 0.14
DDB1-218ENST00000540784 MUC3AQ02505 3323 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 EEF2KO00418 725 aaKnown RBP15.94■□□□□ 0.14
DDB1-218ENST00000540784 SPOPO43791 374 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 RNF40O75150 1001 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 CCDC175P0C221 793 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 POLR2EP19388 210 aaKnown RBP15.94■□□□□ 0.14
DDB1-218ENST00000540784 COMTP21964 271 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 TIE1P35590 1138 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 HCAR3P49019 387 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 TAS2R40P59535 323 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 TPI1P60174 286 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 CCDC173Q0VFZ6 552 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 SEMA3BQ13214 749 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 DMC1Q14565 340 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 ZFYVE27Q5T4F4 411 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 C6orf118Q5T5N4 469 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 RNF219Q5W0B1 726 aaPredicted RBP15.94■□□□□ 0.14
DDB1-218ENST00000540784 TXNRD3NBQ6F5E7 133 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 SETD3Q86TU7 594 aaPredicted RBP15.94■□□□□ 0.14
DDB1-218ENST00000540784 ADIPOR2Q86V24 386 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 KCTD6Q8NC69 237 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 TPCN2Q8NHX9 752 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 ZNF830Q96NB3 372 aaPredicted RBP15.94■□□□□ 0.14
DDB1-218ENST00000540784 KCTD15Q96SI1 283 aaPredicted RBP15.94■□□□□ 0.14
DDB1-218ENST00000540784 TSGA10Q9BZW7 698 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 CIPCQ9C0C6 399 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 CHRDQ9H2X0 955 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 CATSPERBQ9H7T0 1116 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.94■□□□□ 0.14
DDB1-218ENST00000540784 DONSONQ9NYP3 566 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 DLGAP2Q9P1A6 1054 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 F5P12259 2224 aa15.94■□□□□ 0.14
DDB1-218ENST00000540784 H3BRJ5 948 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 ATP5BP06576 529 aaKnown RBP15.93■□□□□ 0.14
DDB1-218ENST00000540784 RHOCP08134 193 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 TNNT1P13805 278 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 GJC1P36383 396 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 ARL4AP40617 200 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 CSKP41240 450 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 KIR2DL1P43626 348 aaPredicted RBP15.93■□□□□ 0.14
DDB1-218ENST00000540784 PLK1P53350 603 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 KRT81Q14533 505 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 EIF4HQ15056 248 aaKnown RBP15.93■□□□□ 0.14
DDB1-218ENST00000540784 DPYSL2Q16555 572 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 ATP13A4Q4VNC1 1196 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 TMEM215Q68D42 235 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 MBLAC2Q68D91 279 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 SDE2Q6IQ49 451 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 CXorf57Q6NSI4 855 aaKnown RBP15.93■□□□□ 0.14
DDB1-218ENST00000540784 Q6ZS52 159 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 DAAM2Q86T65 1068 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 MAP7D3Q8IWC1 876 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 RNF10Q8N5U6 811 aaKnown RBP15.93■□□□□ 0.14
DDB1-218ENST00000540784 DTWD2Q8NBA8 298 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 RPLP0P6Q8NHW5 317 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 KIAA1524Q8TCG1 905 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 USP33Q8TEY7 942 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 TTC17Q96AE7 1141 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 FEM1AQ9BSK4 669 aa15.93■□□□□ 0.14
DDB1-218ENST00000540784 IER2Q9BTL4 223 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms