RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	DMXL2	Q8TDJ6	3036 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	CABIN1	Q9Y6J0	2220 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	MEI4	A8MW99	385 aa		13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475		F5H5T6	163 aa		13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	SIN3B	O75182	1162 aa		13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	DAB1	O75553	588 aa		13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	MOCS2	O96007	188 aa	Predicted RBP	13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	DNTT	P04053	509 aa		13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	KCNA4	P22459	653 aa		13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	EEF1G	P26641	437 aa	Known RBP	13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	KRT9	P35527	623 aa		13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	SCNN1A	P37088	669 aa		13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ST8SIA6	P61647	398 aa		13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ECT2L	Q008S8	904 aa		13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	OTUD1	Q5VV17	481 aa	Predicted RBP	13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ZNF776	Q68DI1	518 aa	Predicted RBP	13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	CXorf57	Q6NSI4	855 aa	Known RBP	13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	RBM43	Q6ZSC3	357 aa	Known RBP	13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	PASD1	Q8IV76	773 aa		13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	APCDD1	Q8J025	514 aa		13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	CCAR2	Q8N163	923 aa	Known RBP	13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	FAM131C	Q96AQ9	280 aa		13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	FAM129B	Q96TA1	746 aa		13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	NPY6R	Q99463	290 aa		13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	BTBD1	Q9H0C5	482 aa		13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	PABPC3	Q9H361	631 aa	Known RBP	13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	C6orf106	Q9H6K1	298 aa	Predicted RBP	13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	SAMSN1	Q9NSI8	373 aa	Known RBP	13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ADAMTS1	Q9UHI8	967 aa		13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475	CHD5	Q8TDI0	1954 aa		13.54	□□□□□ -0.24
SEMA4D-223	ENST00000540475		A0A1B0GVM2	712 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	TCAF2	A6NFQ2	919 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475		H0Y626	953 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	CBFA2T3	O75081	653 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	MOCS3	O95396	460 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	SEMA4F	O95754	770 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	CYP11B1	P15538	503 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ABCB4	P21439	1286 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	MATK	P42679	507 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	CTSO	P43234	321 aa	Predicted RBP	13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	OXCT1	P55809	520 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	SULT2A1	Q06520	285 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	AUH	Q13825	339 aa	Known RBP	13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	KCNJ12	Q14500	433 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	DRAP1	Q14919	205 aa	Predicted RBP	13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	TTC31	Q49AM3	519 aa	Predicted RBP	13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	TCP11X2	Q5H9J9	407 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ARTN	Q5T4W7	220 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	FBXL22	Q6P050	247 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	IL27RA	Q6UWB1	636 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ARC	Q7LC44	396 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	BNIPL	Q7Z465	357 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	GLRX5	Q86SX6	157 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	CHSY1	Q86X52	802 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ZCCHC9	Q8N567	271 aa	Known RBP	13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	OR2I1P	Q8NGU4	316 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ENOX1	Q8TC92	643 aa	Known RBP	13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	PTPRN2	Q92932	1015 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	BIRC7	Q96CA5	298 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ADAM33	Q9BZ11	813 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	MTG2	Q9H4K7	406 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	FAM204A	Q9H8W3	233 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	PLCB1	Q9NQ66	1216 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	DDIT4	Q9NX09	232 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ARHGEF38	Q9NXL2	777 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	EIF2B4	Q9UI10	523 aa	Known RBP	13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	SLCO3A1	Q9UIG8	710 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	PCDHGB2	Q9Y5G2	931 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	OR51B4	Q9Y5P0	310 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	FREM2	Q5SZK8	3169 aa		13.53	□□□□□ -0.24
SEMA4D-223	ENST00000540475	PTPRB	P23467	1997 aa		13.52	□□□□□ -0.24
SEMA4D-223	ENST00000540475	LAMA5	O15230	3695 aa		13.52	□□□□□ -0.24
SEMA4D-223	ENST00000540475	EDDM13	A0A1B0GTR0	161 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	TTC34	A8MYJ7	566 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	TRIM16	O95361	564 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	IGHV4-34	P06331	123 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	PROS1	P07225	676 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	PNMA6A	P0CW24	399 aa	Predicted RBP	13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	UCHL3	P15374	230 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	CD27	P26842	260 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	CXCR3	P49682	368 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	AFF3	P51826	1226 aa	Known RBP	13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	FAM193A	P78312	1265 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	SFSWAP	Q12872	951 aa	Known RBP	13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	CST6	Q15828	149 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	ST3GAL2	Q16842	350 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	RABGAP1L	Q5R372	815 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	CDKAL1	Q5VV42	579 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	OR6B2	Q6IFH4	312 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	FAM124A	Q86V42	546 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	ZNF683	Q8IZ20	524 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	TMEM35B	Q8NCS4	154 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	FRS2	Q8WU20	508 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	IGSF8	Q969P0	613 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	C1orf74	Q96LT6	269 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	PPP1R9B	Q96SB3	815 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	STK33	Q9BYT3	514 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	FZD4	Q9ULV1	537 aa		13.52	□□□□□ -0.25
SEMA4D-223	ENST00000540475	TBC1D30	Q9Y2I9	924 aa		13.52	□□□□□ -0.25

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