RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 GBA3Q9H227 469 aa11.32□□□□□ -0.6
PBX1-212ENST00000540236 SPATA2Q9UM82 520 aa11.32□□□□□ -0.6
PBX1-212ENST00000540236 NCANO14594 1321 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 KCNU1A8MYU2 1149 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 CLDN25C9JDP6 229 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 ZBTB7AO95365 584 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 SERPINB2P05120 415 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 PRDX5P30044 214 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 ECT2LQ008S8 904 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 CAPRIN1Q14444 709 aaKnown RBP11.31□□□□□ -0.6
PBX1-212ENST00000540236 PRKD1Q15139 912 aaPredicted RBP11.31□□□□□ -0.6
PBX1-212ENST00000540236 TWF2Q6IBS0 349 aaKnown RBP11.31□□□□□ -0.6
PBX1-212ENST00000540236 SPOCD1Q6ZMY3 1216 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 SLC26A11Q86WA9 606 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 TMEM35BQ8NCS4 154 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 NXNL1Q96CM4 212 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 ZNF486Q96H40 463 aaPredicted RBP11.31□□□□□ -0.6
PBX1-212ENST00000540236 ZNF668Q96K58 619 aaPredicted RBP11.31□□□□□ -0.6
PBX1-212ENST00000540236 GLT1D1Q96MS3 346 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 VAT1Q99536 393 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 SAV1Q9H4B6 383 aaPredicted RBP11.31□□□□□ -0.6
PBX1-212ENST00000540236 CNOT6Q9ULM6 557 aaKnown RBP11.31□□□□□ -0.6
PBX1-212ENST00000540236 PRPSAP2O60256 369 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 CDH2P19022 906 aaPredicted RBP11.31□□□□□ -0.6
PBX1-212ENST00000540236 IL4RP24394 825 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 GSTO1P78417 241 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 PPM1JQ5JR12 505 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 CYP20A1Q6UW02 462 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 CDC26Q8NHZ8 85 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 PCNPQ8WW12 178 aaKnown RBP11.31□□□□□ -0.6
PBX1-212ENST00000540236 TMEM246Q9BRR3 403 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 NGRNQ9NPE2 291 aaKnown RBP11.31□□□□□ -0.6
PBX1-212ENST00000540236 MTRRQ9UBK8 725 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 ZNF222Q9UK12 451 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 ADGRA2Q96PE1 1338 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 INO80B-WBP1J3KQ70 363 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 TRIM24O15164 1050 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 OR7A10O76100 309 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 NCK1P16333 377 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 GMPRP36959 345 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 TROAPQ12815 778 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 SLC9A5Q14940 896 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 LENG8Q96PV6 779 aaPredicted RBP11.31□□□□□ -0.6
PBX1-212ENST00000540236 BTBD9Q96Q07 612 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 HAPLN3Q96S86 360 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 EHMT1Q9H9B1 1298 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 PARVAQ9NVD7 372 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 CSADQ9Y600 493 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 TET3O43151 1660 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 SLC16A3O15427 465 aaKnown RBP11.31□□□□□ -0.6
PBX1-212ENST00000540236 NUPL2O15504 423 aaKnown RBP11.31□□□□□ -0.6
PBX1-212ENST00000540236 FASP25445 335 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 CCNG2Q16589 344 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 BROXQ5VW32 411 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 ZFP1Q6P2D0 407 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 KRT28Q7Z3Y7 464 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 ADGRF4Q8IZF3 695 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 DDX43Q9NXZ2 648 aaKnown RBP11.31□□□□□ -0.6
PBX1-212ENST00000540236 SLC27A5Q9Y2P5 690 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 CDY2AQ9Y6F7 541 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 CDY1Q9Y6F8 540 aa11.31□□□□□ -0.6
PBX1-212ENST00000540236 A0A0B4J269 797 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 SAGE2PA6NJ88 616 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 MTSS1O43312 755 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 CD4P01730 458 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 RAB14P61106 215 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 SEZ6Q53EL9 994 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 GALNT5Q7Z7M9 940 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 PROX1Q92786 737 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 IDI2Q9BXS1 227 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 WDR12Q9GZL7 423 aaKnown RBP11.3□□□□□ -0.6
PBX1-212ENST00000540236 BTNL10A8MVZ5 291 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 FARP2O94887 1054 aaPredicted RBP11.3□□□□□ -0.6
PBX1-212ENST00000540236 SNX16P57768 344 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 CA9Q16790 459 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 VPS33AQ96AX1 596 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 SLC4A9Q96Q91 983 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 GFM1Q96RP9 751 aaKnown RBP11.3□□□□□ -0.6
PBX1-212ENST00000540236 UGT2A1Q9Y4X1 527 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 ACTL7BQ9Y614 415 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 CASZ1Q86V15 1759 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 MYPNQ86TC9 1320 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 TCRBV7S3A2A0A539 114 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 PRR23AA6NEV1 266 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 LRPAP1P30533 357 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 ALDH1B1P30837 517 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 CLCQ05315 142 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 ARCQ7LC44 396 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 FAM162AQ96A26 154 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 CERS2Q96G23 380 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 CEP95Q96GE4 821 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 LRRC19Q9H756 370 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 LGALS13Q9UHV8 139 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 KAT6BQ8WYB5 2073 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 I3L521 148 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 SMIM18P0DKX4 95 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 MPSTP25325 297 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 SEC23AQ15436 765 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 FAM9CQ8IZT9 166 aa11.3□□□□□ -0.6
PBX1-212ENST00000540236 LILRB4Q8NHJ6 448 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms