RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 GABRG3Q99928 467 aa13.84□□□□□ -0.19
PRPF19-204ENST00000539960 FAM86C1Q9NVL1 165 aa13.84□□□□□ -0.19
PRPF19-204ENST00000539960 PPARGC1AQ9UBK2 798 aaKnown RBP13.84□□□□□ -0.19
PRPF19-204ENST00000539960 INTS6Q9UL03 887 aaKnown RBP13.84□□□□□ -0.19
PRPF19-204ENST00000539960 TBC1D30Q9Y2I9 924 aa13.84□□□□□ -0.19
PRPF19-204ENST00000539960 PCDHGA2Q9Y5H1 932 aa13.84□□□□□ -0.19
PRPF19-204ENST00000539960 STON1Q9Y6Q2 735 aa13.84□□□□□ -0.19
PRPF19-204ENST00000539960 CCDC163A0A0D9SF12 145 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 WASH3PC4AMC7 463 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 FAM72CH0Y354 149 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 MOCS3O95396 460 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 APBB3O95704 486 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 DLDP09622 509 aaKnown RBP13.83□□□□□ -0.2
PRPF19-204ENST00000539960 H2AFZP0C0S5 128 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 NBL1P41271 181 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 PXNP49023 591 aaPredicted RBP13.83□□□□□ -0.2
PRPF19-204ENST00000539960 FNTBP49356 437 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 AIF1P55008 147 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 PIGHQ14442 188 aaPredicted RBP13.83□□□□□ -0.2
PRPF19-204ENST00000539960 ZNF234Q14588 700 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 FUT11Q495W5 492 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 ALFQ53S48 1182 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 PITRM1Q5JRX3 1037 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 FAM72AQ5TYM5 149 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 FAM72DQ6L9T8 149 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 CXorf57Q6NSI4 855 aaKnown RBP13.83□□□□□ -0.2
PRPF19-204ENST00000539960 H2AFVQ71UI9 128 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 LONP2Q86WA8 852 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 FAM72BQ86X60 149 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 APCDD1Q8J025 514 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 TSTD1Q8NFU3 115 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 ARHGEF26Q96DR7 871 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 ALG14Q96F25 216 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 HHIPQ96QV1 700 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 PANX2Q96RD6 677 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 PPP1R9BQ96SB3 815 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 NCAPGQ9BPX3 1015 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 NUP85Q9BW27 656 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 POLMQ9NP87 494 aaPredicted RBP13.83□□□□□ -0.2
PRPF19-204ENST00000539960 SPTLC3Q9NUV7 552 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 CACNA2D2Q9NY47 1150 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 MPP6Q9NZW5 540 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 EBF1Q9UH73 591 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 FZD10Q9ULW2 581 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 R4GN57 208 aa13.83□□□□□ -0.2
PRPF19-204ENST00000539960 A0A1W2PQF6 199 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 MYO1FO00160 1098 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 LILRB5O75023 590 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 ALDH1A2O94788 518 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 ASLP04424 464 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 HOXB2P14652 356 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 MZF1P28698 734 aaPredicted RBP13.82□□□□□ -0.2
PRPF19-204ENST00000539960 L1CAMP32004 1257 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 CSKP41240 450 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 IL12RB1P42701 662 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 PTPRNQ16849 979 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 PLEKHG6Q3KR16 790 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 EFHC2Q5JST6 749 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 MANEALQ5VSG8 457 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 ZC3H14Q6PJT7 736 aaKnown RBP13.82□□□□□ -0.2
PRPF19-204ENST00000539960 SETD3Q86TU7 594 aaPredicted RBP13.82□□□□□ -0.2
PRPF19-204ENST00000539960 WDR5BQ86VZ2 330 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 PYROXD2Q8N2H3 581 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 OR52K2Q8NGK3 314 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 CYB5D2Q8WUJ1 264 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 CTNNBL1Q8WYA6 563 aaPredicted RBP13.82□□□□□ -0.2
PRPF19-204ENST00000539960 FEM1AQ9BSK4 669 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 PACSIN1Q9BY11 444 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 ZYG11BQ9C0D3 744 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 SEMA4AQ9H3S1 761 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 RETREG1Q9H6L5 497 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 IP6K2Q9UHH9 426 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 KIAA1549LQ6ZVL6 1849 aa13.82□□□□□ -0.2
PRPF19-204ENST00000539960 PROB1E7EW31 1015 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 AXIN1O15169 862 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 HRO43593 1189 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 LRIG2O94898 1065 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 TMEM253P0C7T8 217 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 RHOQP17081 205 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 MIPP30301 263 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 CDC25BP30305 580 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 CNR2P34972 360 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 PCK1P35558 622 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 ECT2LQ008S8 904 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 ERMARDQ5T6L9 678 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 RNF219Q5W0B1 726 aaPredicted RBP13.81□□□□□ -0.2
PRPF19-204ENST00000539960 KIAA1211LQ6NV74 962 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 RWDD4Q6NW29 188 aaKnown RBP13.81□□□□□ -0.2
PRPF19-204ENST00000539960 SERPINA13PQ6UXR4 307 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 TFAP2DQ7Z6R9 452 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 RASSF3Q86WH2 238 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 CCDC170Q8IYT3 715 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 NIPA2Q8N8Q9 360 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 TMEM245Q9H330 911 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 CD248Q9HCU0 757 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 CTTNBP2NLQ9P2B4 639 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 IMPACTQ9P2X3 320 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 UVRAGQ9P2Y5 699 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 ZNF212Q9UDV6 495 aa13.81□□□□□ -0.2
PRPF19-204ENST00000539960 PCSK1NQ9UHG2 260 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms