RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 CD48P09326 243 aa15.87■□□□□ 0.13
DDB1-216ENST00000539739 HOXD9P28356 352 aaPredicted RBP15.87■□□□□ 0.13
DDB1-216ENST00000539739 TNNT3P45378 269 aaPredicted RBP15.87■□□□□ 0.13
DDB1-216ENST00000539739 CDH18Q13634 790 aa15.87■□□□□ 0.13
DDB1-216ENST00000539739 CIR1Q86X95 450 aaPredicted RBP15.87■□□□□ 0.13
DDB1-216ENST00000539739 MFN1Q8IWA4 741 aa15.87■□□□□ 0.13
DDB1-216ENST00000539739 TSC1Q92574 1164 aa15.87■□□□□ 0.13
DDB1-216ENST00000539739 ALG3Q92685 438 aa15.87■□□□□ 0.13
DDB1-216ENST00000539739 EXOC4Q96A65 974 aa15.87■□□□□ 0.13
DDB1-216ENST00000539739 TLR10Q9BXR5 811 aa15.87■□□□□ 0.13
DDB1-216ENST00000539739 SLC2A11Q9BYW1 496 aa15.87■□□□□ 0.13
DDB1-216ENST00000539739 C8orf33Q9H7E9 229 aaPredicted RBP15.87■□□□□ 0.13
DDB1-216ENST00000539739 FEZ2Q9UHY8 353 aaPredicted RBP15.87■□□□□ 0.13
DDB1-216ENST00000539739 KIF26AQ9ULI4 1882 aaPredicted RBP15.87■□□□□ 0.13
DDB1-216ENST00000539739 C3orf70A6NLC5 250 aaPredicted RBP15.86■□□□□ 0.13
DDB1-216ENST00000539739 KCNK3O14649 394 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 ENC1O14682 589 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 CACNG3O60359 315 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 LUC7L3O95232 432 aaKnown RBP15.86■□□□□ 0.13
DDB1-216ENST00000539739 GLULP15104 373 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 ERCC2P18074 760 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 IL4RP24394 825 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 OR1E1P30953 314 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 GJA4P35212 333 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 MAPKAPK2P49137 400 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 OXCT1P55809 520 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 ETF1P62495 437 aaKnown RBP15.86■□□□□ 0.13
DDB1-216ENST00000539739 MMRN1Q13201 1228 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 DPYSQ14117 519 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 PREPLQ4J6C6 727 aaPredicted RBP15.86■□□□□ 0.13
DDB1-216ENST00000539739 ALFQ53S48 1182 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 ANKRD20A8PQ5CZ79 823 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 TFDP3Q5H9I0 405 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 SEL1L2Q5TEA6 688 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 MFSD7Q6UXD7 560 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 SPOCD1Q6ZMY3 1216 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 TFAP2DQ7Z6R9 452 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 UBALD2Q8IYN6 164 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 NAT16Q8N8M0 369 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.86■□□□□ 0.13
DDB1-216ENST00000539739 PRDM16Q9HAZ2 1276 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 TMEM248Q9NWD8 314 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 CTAGE9A4FU28 777 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 WASH4PA8MWX3 477 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 TUBB4AP04350 444 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 PYGMP11217 842 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 ZFXP17010 805 aaPredicted RBP15.86■□□□□ 0.13
DDB1-216ENST00000539739 AMPD1P23109 780 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 CDKN2BP42772 138 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 IRAK1P51617 712 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 SATB1Q01826 763 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 TFDP2Q14188 446 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 PPP2R5EQ16537 467 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 ARTNQ5T4W7 220 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 C6orf118Q5T5N4 469 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 RNF43Q68DV7 783 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 SETD3Q86TU7 594 aaPredicted RBP15.86■□□□□ 0.13
DDB1-216ENST00000539739 NLRP14Q86W24 1093 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 RTL3Q8N8U3 475 aaKnown RBP15.86■□□□□ 0.13
DDB1-216ENST00000539739 FIBINQ8TAL6 211 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 FAF2Q96CS3 445 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 MSANTD3Q96H12 275 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 RNF157Q96PX1 679 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 WDR24Q96S15 920 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 NAPGQ99747 312 aaPredicted RBP15.86■□□□□ 0.13
DDB1-216ENST00000539739 CARD9Q9H257 536 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 ARHGEF4Q9NR80 690 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 HEBP1Q9NRV9 189 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 DNAJC17Q9NVM6 304 aaKnown RBP15.86■□□□□ 0.13
DDB1-216ENST00000539739 DEC1Q9P2X7 70 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 NEU3Q9UQ49 428 aa15.86■□□□□ 0.13
DDB1-216ENST00000539739 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.85■□□□□ 0.13
DDB1-216ENST00000539739 KIF2AO00139 706 aaPredicted RBP15.85■□□□□ 0.13
DDB1-216ENST00000539739 ATP1A1P05023 1023 aaKnown RBP15.85■□□□□ 0.13
DDB1-216ENST00000539739 EIF2DP41214 584 aaKnown RBP15.85■□□□□ 0.13
DDB1-216ENST00000539739 SLC44A4Q53GD3 710 aa15.85■□□□□ 0.13
DDB1-216ENST00000539739 C1orf228Q6PIY5 440 aa15.85■□□□□ 0.13
DDB1-216ENST00000539739 TMCO3Q6UWJ1 677 aa15.85■□□□□ 0.13
DDB1-216ENST00000539739 NYAP1Q6ZVC0 841 aa15.85■□□□□ 0.13
DDB1-216ENST00000539739 RALGPS2Q86X27 583 aaPredicted RBP15.85■□□□□ 0.13
DDB1-216ENST00000539739 RFX6Q8HWS3 928 aa15.85■□□□□ 0.13
DDB1-216ENST00000539739 LZTR1Q8N653 840 aa15.85■□□□□ 0.13
DDB1-216ENST00000539739 MNS1Q8NEH6 495 aa15.85■□□□□ 0.13
DDB1-216ENST00000539739 PCDH19Q8TAB3 1148 aa15.85■□□□□ 0.13
DDB1-216ENST00000539739 P2RY11Q96G91 374 aa15.85■□□□□ 0.13
DDB1-216ENST00000539739 C16orf45Q96MC5 204 aaPredicted RBP15.85■□□□□ 0.13
DDB1-216ENST00000539739 UHRF1Q96T88 793 aaPredicted RBP15.85■□□□□ 0.13
DDB1-216ENST00000539739 KIAA1522Q9P206 1035 aaPredicted RBP15.85■□□□□ 0.13
DDB1-216ENST00000539739 FBXO10Q9UK96 956 aa15.85■□□□□ 0.13
DDB1-216ENST00000539739 PIAS3Q9Y6X2 628 aa15.85■□□□□ 0.13
DDB1-216ENST00000539739 MYOFQ9NZM1 2061 aa15.84■□□□□ 0.13
DDB1-216ENST00000539739 RHOCP08134 193 aa15.84■□□□□ 0.13
DDB1-216ENST00000539739 CASQ1P31415 396 aa15.84■□□□□ 0.13
DDB1-216ENST00000539739 SERPINB6P35237 376 aa15.84■□□□□ 0.13
DDB1-216ENST00000539739 DGKGP49619 791 aa15.84■□□□□ 0.13
DDB1-216ENST00000539739 ZNF211Q13398 564 aaPredicted RBP15.84■□□□□ 0.13
DDB1-216ENST00000539739 TAZQ16635 292 aa15.84■□□□□ 0.13
DDB1-216ENST00000539739 GAB4Q2WGN9 574 aa15.84■□□□□ 0.13
DDB1-216ENST00000539739 KAZNQ674X7 775 aa15.84■□□□□ 0.13
DDB1-216ENST00000539739 NUDT18Q6ZVK8 323 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms