RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 ZNF419Q96HQ0 510 aaPredicted RBP5.72□□□□□ -1.49
CCDC7-209ENST00000539197 PLEKHB1Q9UF11 243 aaPredicted RBP5.72□□□□□ -1.49
CCDC7-209ENST00000539197 FBXO4Q9UKT5 387 aa5.72□□□□□ -1.49
CCDC7-209ENST00000539197 CLEC18AA5D8T8 446 aa5.71□□□□□ -1.5
CCDC7-209ENST00000539197 PRSS47A8MTI9 375 aa5.71□□□□□ -1.5
CCDC7-209ENST00000539197 NEURL1O76050 574 aa5.71□□□□□ -1.5
CCDC7-209ENST00000539197 LCATP04180 440 aa5.71□□□□□ -1.5
CCDC7-209ENST00000539197 STT3AP46977 705 aa5.71□□□□□ -1.5
CCDC7-209ENST00000539197 ART1P52961 327 aa5.71□□□□□ -1.5
CCDC7-209ENST00000539197 ABATP80404 500 aa5.71□□□□□ -1.5
CCDC7-209ENST00000539197 Q0VFX4 171 aa5.71□□□□□ -1.5
CCDC7-209ENST00000539197 GPR18Q14330 331 aa5.71□□□□□ -1.5
CCDC7-209ENST00000539197 SHBQ15464 509 aa5.71□□□□□ -1.5
CCDC7-209ENST00000539197 PRSS57Q6UWY2 283 aa5.71□□□□□ -1.5
CCDC7-209ENST00000539197 ZNF329Q86UD4 541 aa5.71□□□□□ -1.5
CCDC7-209ENST00000539197 CLEC18CQ8NCF0 446 aa5.71□□□□□ -1.5
CCDC7-209ENST00000539197 ENGASEQ8NFI3 743 aa5.71□□□□□ -1.5
CCDC7-209ENST00000539197 ADAMTS14Q8WXS8 1223 aa5.71□□□□□ -1.5
CCDC7-209ENST00000539197 FAR2Q96K12 515 aa5.71□□□□□ -1.5
CCDC7-209ENST00000539197 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.71□□□□□ -1.5
CCDC7-209ENST00000539197 OSBPL5Q9H0X9 879 aaPredicted RBP5.71□□□□□ -1.5
CCDC7-209ENST00000539197 RGL1Q9NZL6 768 aa5.71□□□□□ -1.5
CCDC7-209ENST00000539197 LMTK3Q96Q04 1460 aa5.71□□□□□ -1.5
CCDC7-209ENST00000539197 GXYLT2A0PJZ3 443 aa5.7□□□□□ -1.5
CCDC7-209ENST00000539197 FAM234BA2RU67 622 aa5.7□□□□□ -1.5
CCDC7-209ENST00000539197 I6L893 689 aaPredicted RBP5.7□□□□□ -1.5
CCDC7-209ENST00000539197 APOL1O14791 398 aa5.7□□□□□ -1.5
CCDC7-209ENST00000539197 GRID2O43424 1007 aa5.7□□□□□ -1.5
CCDC7-209ENST00000539197 ZNF432O94892 652 aa5.7□□□□□ -1.5
CCDC7-209ENST00000539197 ALDOCP09972 364 aaKnown RBP5.7□□□□□ -1.5
CCDC7-209ENST00000539197 ARSBP15848 533 aa5.7□□□□□ -1.5
CCDC7-209ENST00000539197 COMPP49747 757 aaPredicted RBP5.7□□□□□ -1.5
CCDC7-209ENST00000539197 POLE2P56282 527 aa5.7□□□□□ -1.5
CCDC7-209ENST00000539197 NSUN2Q08J23 767 aaKnown RBP eCLIP5.7□□□□□ -1.5
CCDC7-209ENST00000539197 CSHL1Q14406 222 aa5.7□□□□□ -1.5
CCDC7-209ENST00000539197 C10orf76Q5T2E6 689 aa5.7□□□□□ -1.5
CCDC7-209ENST00000539197 OTUD1Q5VV17 481 aaPredicted RBP5.7□□□□□ -1.5
CCDC7-209ENST00000539197 FAM83HQ6ZRV2 1179 aaPredicted RBP5.7□□□□□ -1.5
CCDC7-209ENST00000539197 TMPRSS12Q86WS5 348 aa5.7□□□□□ -1.5
CCDC7-209ENST00000539197 CADM3Q8N126 398 aa5.7□□□□□ -1.5
CCDC7-209ENST00000539197 GABPB2Q8TAK5 448 aaPredicted RBP5.7□□□□□ -1.5
CCDC7-209ENST00000539197 POLDIP3Q9BY77 421 aaKnown RBP5.7□□□□□ -1.5
CCDC7-209ENST00000539197 EPS8L2Q9H6S3 715 aa5.7□□□□□ -1.5
CCDC7-209ENST00000539197 SFXN1Q9H9B4 322 aa5.7□□□□□ -1.5
CCDC7-209ENST00000539197 KCNK9Q9NPC2 374 aa5.7□□□□□ -1.5
CCDC7-209ENST00000539197 DDX21Q9NR30 783 aaKnown RBP eCLIP5.7□□□□□ -1.5
CCDC7-209ENST00000539197 FZD10Q9ULW2 581 aa5.7□□□□□ -1.5
CCDC7-209ENST00000539197 TNFSF13BQ9Y275 285 aa5.7□□□□□ -1.5
CCDC7-209ENST00000539197 LINC01565O15544 149 aa5.69□□□□□ -1.5
CCDC7-209ENST00000539197 LCKP06239 509 aa5.69□□□□□ -1.5
CCDC7-209ENST00000539197 SLC5A1P13866 664 aa5.69□□□□□ -1.5
CCDC7-209ENST00000539197 GALNT3Q14435 633 aa5.69□□□□□ -1.5
CCDC7-209ENST00000539197 ALG10Q5BKT4 473 aa5.69□□□□□ -1.5
CCDC7-209ENST00000539197 ALG10BQ5I7T1 473 aa5.69□□□□□ -1.5
CCDC7-209ENST00000539197 MDGA2Q7Z553 956 aa5.69□□□□□ -1.5
CCDC7-209ENST00000539197 ADAD1Q96M93 576 aaKnown RBP5.69□□□□□ -1.5
CCDC7-209ENST00000539197 ZNF304Q9HCX3 659 aa5.69□□□□□ -1.5
CCDC7-209ENST00000539197 TXNRD2Q9NNW7 524 aa5.69□□□□□ -1.5
CCDC7-209ENST00000539197 PNMA6EA0A0J9YXQ4 647 aa5.68□□□□□ -1.5
CCDC7-209ENST00000539197 BTBD18B2RXH4 712 aa5.68□□□□□ -1.5
CCDC7-209ENST00000539197 MSI1O43347 362 aaKnown RBP5.68□□□□□ -1.5
CCDC7-209ENST00000539197 LDB3O75112 727 aa5.68□□□□□ -1.5
CCDC7-209ENST00000539197 PPP1R3DO95685 299 aa5.68□□□□□ -1.5
CCDC7-209ENST00000539197 PRSS2P07478 247 aa5.68□□□□□ -1.5
CCDC7-209ENST00000539197 HARSP12081 509 aaKnown RBP5.68□□□□□ -1.5
CCDC7-209ENST00000539197 ATF3P18847 181 aa5.68□□□□□ -1.5
CCDC7-209ENST00000539197 PMS2P54278 862 aa5.68□□□□□ -1.5
CCDC7-209ENST00000539197 DSC1Q08554 894 aa5.68□□□□□ -1.5
CCDC7-209ENST00000539197 PMS2P11Q13670 270 aa5.68□□□□□ -1.5
CCDC7-209ENST00000539197 GRM4Q14833 912 aa5.68□□□□□ -1.5
CCDC7-209ENST00000539197 MAPKAPK3Q16644 382 aa5.68□□□□□ -1.5
CCDC7-209ENST00000539197 ARL13AQ5H913 290 aaPredicted RBP5.68□□□□□ -1.5
CCDC7-209ENST00000539197 ANKRD40Q6AI12 368 aa5.68□□□□□ -1.5
CCDC7-209ENST00000539197 HIBCHQ6NVY1 386 aaPredicted RBP5.68□□□□□ -1.5
CCDC7-209ENST00000539197 RASGRP3Q8IV61 690 aa5.68□□□□□ -1.5
CCDC7-209ENST00000539197 PAAF1Q9BRP4 392 aa5.68□□□□□ -1.5
CCDC7-209ENST00000539197 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.68□□□□□ -1.5
CCDC7-209ENST00000539197 FAM50BQ9Y247 325 aa5.68□□□□□ -1.5
CCDC7-209ENST00000539197 CER1O95813 267 aa5.67□□□□□ -1.5
CCDC7-209ENST00000539197 GLUD1P00367 558 aa5.67□□□□□ -1.5
CCDC7-209ENST00000539197 GLUD2P49448 558 aa5.67□□□□□ -1.5
CCDC7-209ENST00000539197 AAK1Q2M2I8 961 aa5.67□□□□□ -1.5
CCDC7-209ENST00000539197 DNTTIP2Q5QJE6 756 aaKnown RBP5.67□□□□□ -1.5
CCDC7-209ENST00000539197 FNBP1LQ5T0N5 605 aa5.67□□□□□ -1.5
CCDC7-209ENST00000539197 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.67□□□□□ -1.5
CCDC7-209ENST00000539197 WDR75Q8IWA0 830 aaKnown RBP5.67□□□□□ -1.5
CCDC7-209ENST00000539197 TXLNBQ8N3L3 684 aa5.67□□□□□ -1.5
CCDC7-209ENST00000539197 TBCBQ99426 244 aa5.67□□□□□ -1.5
CCDC7-209ENST00000539197 WDR77Q9BQA1 342 aaPredicted RBP5.67□□□□□ -1.5
CCDC7-209ENST00000539197 COLEC11Q9BWP8 271 aa5.67□□□□□ -1.5
CCDC7-209ENST00000539197 EIF2AQ9BY44 585 aaKnown RBP5.67□□□□□ -1.5
CCDC7-209ENST00000539197 ERRFI1Q9UJM3 462 aaPredicted RBP5.67□□□□□ -1.5
CCDC7-209ENST00000539197 LOC105369274A0A096LPK9 316 aa5.66□□□□□ -1.5
CCDC7-209ENST00000539197 LOC102723532A0A0G2JNH3 316 aa5.66□□□□□ -1.5
CCDC7-209ENST00000539197 PCDH17O14917 1159 aa5.66□□□□□ -1.5
CCDC7-209ENST00000539197 NKX2-8O15522 239 aa5.66□□□□□ -1.5
CCDC7-209ENST00000539197 NCK2O43639 380 aa5.66□□□□□ -1.5
CCDC7-209ENST00000539197 DDNO94850 711 aaPredicted RBP5.66□□□□□ -1.5
CCDC7-209ENST00000539197 ALDOAP04075 364 aaKnown RBP5.66□□□□□ -1.5
CCDC7-209ENST00000539197 CLCN5P51795 746 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms