RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 KRT72Q14CN4 511 aa25.51■■□□□ 1.68
RAB40C-204ENST00000538492 TIGD5Q53EQ6 642 aa25.51■■□□□ 1.68
RAB40C-204ENST00000538492 AGMOQ6ZNB7 445 aa25.51■■□□□ 1.68
RAB40C-204ENST00000538492 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.51■■□□□ 1.68
RAB40C-204ENST00000538492 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.51■■□□□ 1.681e-6■■■□□ 14.6
RAB40C-204ENST00000538492 APOL2Q9BQE5 337 aa25.51■■□□□ 1.68
RAB40C-204ENST00000538492 WDCPQ9H6R7 721 aa25.51■■□□□ 1.68
RAB40C-204ENST00000538492 TAS2R1Q9NYW7 299 aa25.51■■□□□ 1.68
RAB40C-204ENST00000538492 C9IYK1 514 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 CHRNA1P02708 482 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 AIF1P55008 147 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 GJA9P57773 515 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 PPIDQ08752 370 aaKnown RBP25.51■■□□□ 1.67
RAB40C-204ENST00000538492 ARL13BQ3SXY8 428 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 ATP2A3Q93084 1043 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 ZNF669Q96BR6 464 aaPredicted RBP25.51■■□□□ 1.67
RAB40C-204ENST00000538492 OR12D3Q9UGF7 316 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 ITM2AO43736 263 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 GLRA3O75311 464 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 ZBTB17Q13105 803 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 BHLHA9Q7RTU4 235 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 TREML1Q86YW5 311 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 GPATCH11Q8N954 259 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 RAB3IL1Q8TBN0 382 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 ACMSDQ8TDX5 336 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 HASPINQ8TF76 798 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 MYLPFQ96A32 169 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 SMARCD1Q96GM5 515 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 APBA2Q99767 749 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 EBF4Q9BQW3 602 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 WWP1Q9H0M0 922 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 THAP1Q9NVV9 213 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 CDH9Q9ULB4 789 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 VANGL2Q9ULK5 521 aa25.51■■□□□ 1.67
RAB40C-204ENST00000538492 AP2A1O95782 977 aa25.5■■□□□ 1.67
RAB40C-204ENST00000538492 TYK2P29597 1187 aa25.5■■□□□ 1.67
RAB40C-204ENST00000538492 CD68P34810 354 aaPredicted RBP25.5■■□□□ 1.67
RAB40C-204ENST00000538492 WASHC2DQ5SRD0 308 aa25.5■■□□□ 1.67
RAB40C-204ENST00000538492 MBLAC2Q68D91 279 aa25.5■■□□□ 1.67
RAB40C-204ENST00000538492 C4orf50Q6ZRC1 276 aa25.5■■□□□ 1.67
RAB40C-204ENST00000538492 CMC1Q7Z7K0 106 aa25.5■■□□□ 1.67
RAB40C-204ENST00000538492 MCUR1Q96AQ8 359 aa25.5■■□□□ 1.67
RAB40C-204ENST00000538492 RILPQ96NA2 401 aa25.5■■□□□ 1.67
RAB40C-204ENST00000538492 PLIN3O60664 434 aa25.5■■□□□ 1.67
RAB40C-204ENST00000538492 PGK1P00558 417 aa25.5■■□□□ 1.67
RAB40C-204ENST00000538492 ENO1P06733 434 aaKnown RBP25.5■■□□□ 1.67
RAB40C-204ENST00000538492 AKR1A1P14550 325 aa25.5■■□□□ 1.67
RAB40C-204ENST00000538492 TRPV1Q8NER1 839 aa25.5■■□□□ 1.67
RAB40C-204ENST00000538492 AZIN2Q96A70 460 aa25.5■■□□□ 1.67
RAB40C-204ENST00000538492 CELF6Q96J87 481 aaKnown RBP25.5■■□□□ 1.67
RAB40C-204ENST00000538492 UBP1Q9NZI7 540 aa25.5■■□□□ 1.67
RAB40C-204ENST00000538492 TNPO2O14787 897 aaKnown RBP25.49■■□□□ 1.67
RAB40C-204ENST00000538492 ATP9BO43861 1147 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 POMCP01189 267 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 BDNFP23560 247 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 ELF1P32519 619 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 ALDH18A1P54886 795 aaKnown RBP25.49■■□□□ 1.67
RAB40C-204ENST00000538492 SPANXN3Q5MJ09 141 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 RSRC1Q96IZ7 334 aaKnown RBP25.49■■□□□ 1.67
RAB40C-204ENST00000538492 AGAP2Q99490 1192 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 RTP3Q9BQQ7 232 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 AGO3Q9H9G7 860 aaKnown RBP25.49■■□□□ 1.67
RAB40C-204ENST00000538492 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.49■■□□□ 1.67
RAB40C-204ENST00000538492 ZNF358Q9NW07 568 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 PTCH2Q9Y6C5 1203 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 TPBGLP0DKB5 382 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 FGF3P11487 239 aaPredicted RBP25.49■■□□□ 1.67
RAB40C-204ENST00000538492 GP5P40197 560 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 ABCG1P45844 678 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 RCN2Q14257 317 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 UPP1Q16831 310 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 CERCAMQ5T4B2 595 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 SMC1BQ8NDV3 1235 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 RNF34Q969K3 372 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 PGAP3Q96FM1 320 aaPredicted RBP25.49■■□□□ 1.67
RAB40C-204ENST00000538492 LRRC40Q9H9A6 602 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 RRAGCQ9HB90 399 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 BFARQ9NZS9 450 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 DCDC2Q9UHG0 476 aa25.49■■□□□ 1.67
RAB40C-204ENST00000538492 LRIG2O94898 1065 aa25.48■■□□□ 1.67
RAB40C-204ENST00000538492 NFKB1P19838 968 aa25.48■■□□□ 1.67
RAB40C-204ENST00000538492 ZNF157P51786 506 aaPredicted RBP25.48■■□□□ 1.67
RAB40C-204ENST00000538492 NAB1Q13506 487 aa25.48■■□□□ 1.67
RAB40C-204ENST00000538492 PCLAFQ15004 111 aa25.48■■□□□ 1.67
RAB40C-204ENST00000538492 MFSD3Q96ES6 412 aa25.48■■□□□ 1.67
RAB40C-204ENST00000538492 ZNF570Q96NI8 536 aa25.48■■□□□ 1.67
RAB40C-204ENST00000538492 MLPHQ9BV36 600 aaPredicted RBP25.48■■□□□ 1.67
RAB40C-204ENST00000538492 SENP6Q9GZR1 1112 aaPredicted RBP25.48■■□□□ 1.67
RAB40C-204ENST00000538492 TMEM216Q9P0N5 145 aa25.48■■□□□ 1.67
RAB40C-204ENST00000538492 NCAM2O15394 837 aa25.48■■□□□ 1.67
RAB40C-204ENST00000538492 BRCC3P46736 316 aa25.48■■□□□ 1.67
RAB40C-204ENST00000538492 HCAR3P49019 387 aa25.48■■□□□ 1.67
RAB40C-204ENST00000538492 KHDC1Q4VXA5 237 aaKnown RBP25.48■■□□□ 1.67
RAB40C-204ENST00000538492 C17orf99Q6UX52 265 aa25.48■■□□□ 1.67
RAB40C-204ENST00000538492 C10orf107Q8IVU9 208 aa25.48■■□□□ 1.67
RAB40C-204ENST00000538492 SERBP1Q8NC51 408 aaKnown RBP eCLIP25.48■■□□□ 1.67
RAB40C-204ENST00000538492 EPAS1Q99814 870 aa25.48■■□□□ 1.67
RAB40C-204ENST00000538492 LBHD1Q9BQE6 289 aaPredicted RBP25.48■■□□□ 1.67
RAB40C-204ENST00000538492 CAPN14A8MX76 684 aa25.47■■□□□ 1.67
RAB40C-204ENST00000538492 B3GAT3O94766 335 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms