RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 CDH18Q13634 790 aa10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 GLE1Q53GS7 698 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 C6orf118Q5T5N4 469 aa10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 HEATR6Q6AI08 1181 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 SLC9A4Q6AI14 798 aa10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 IL31Q6EBC2 164 aa10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 OTOP3Q7RTS5 596 aa10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 BBS7Q8IWZ6 715 aa10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 NPAS3Q8IXF0 933 aa10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 MMGT1Q8N4V1 131 aa10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ATPAF2Q8N5M1 289 aa10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 PQLC3Q8N755 202 aa10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 FAM71BQ8TC56 605 aa10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 BPIFB1Q8TDL5 484 aa10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TFB1MQ8WVM0 346 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 TSC1Q92574 1164 aa10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CELF6Q96J87 481 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 ZSWIM3Q96MP5 696 aa10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CDX2Q99626 313 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 RAB17Q9H0T7 212 aa10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 MUC3BQ9H195 1237 aa10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 HAUS2Q9NVX0 235 aa10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 CLEC1BQ9P126 229 aa10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 SAE1Q9UBE0 346 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 R3HDM2Q9Y2K5 976 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 RAD54BQ9Y620 910 aa10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 V9GYY5 206 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF1A-211ENST00000538363 DENND4CQ5VZ89 1909 aa10.96□□□□□ -0.66
TNFRSF1A-211ENST00000538363 CFAP69A5D8W1 941 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 HACD1B0YJ81 288 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 LIASO43766 372 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 RAMP2O60895 175 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TBX10O75333 385 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 HOXB3P14651 431 aaPredicted RBP10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 SP100P23497 879 aaPredicted RBP10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 IL4RP24394 825 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 MCM3P25205 808 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 SLC6A4P31645 630 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ETFBP38117 255 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ADCY8P40145 1251 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 VIPR2P41587 438 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 MAPKAPK2P49137 400 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 LMAN1P49257 510 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 FNTAP49354 379 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 OXCT1P55809 520 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 GBE1Q04446 702 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 XRCC4Q13426 336 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 DPYSQ14117 519 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 DHX34Q14147 1143 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 POLD3Q15054 466 aaPredicted RBP10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PAFAH1B3Q15102 231 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TAZQ16635 292 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 FAM78AQ5JUQ0 283 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 NCBP2-AS2Q69YL0 99 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 NADSYN1Q6IA69 706 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ANKS1BQ7Z6G8 1248 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 CIR1Q86X95 450 aaPredicted RBP10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 CCDC33Q8N5R6 958 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 RTL3Q8N8U3 475 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PRELID2Q8N945 189 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 CCHCR1Q8TD31 782 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 IGSF8Q969P0 613 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 FAF2Q96CS3 445 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 OTUB2Q96DC9 234 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 BRD8Q9H0E9 1235 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 RETREG1Q9H6L5 497 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 LRRC19Q9H756 370 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 SP110Q9HB58 689 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ASIC3Q9UHC3 531 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 AMACRQ9UHK6 382 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 DNPEPQ9ULA0 475 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 FAM50BQ9Y247 325 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 CCL26Q9Y258 94 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 DRG1Q9Y295 367 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 OBSL1O75147 1896 aa10.95□□□□□ -0.66
TNFRSF1A-211ENST00000538363 SZT2Q5T011 3432 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 A0A1B0GVM2 712 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TCAF2A6NFQ2 919 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 FAM187AA6NFU0 413 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 DRGXA6NNA5 263 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 HEPACAM2A8MVW5 462 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 KCNN4O15554 427 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 MTSS1O43312 755 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 MFSD11O43934 449 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 CNTN5O94779 1100 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PRAMEF12O95522 483 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 NFATC1O95644 943 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ADH1CP00326 375 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 KRT14P02533 472 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 PECAM1P16284 738 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 STIP1P31948 543 aaKnown RBP10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 NDST2P52849 883 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 TERF1P54274 439 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 RPS24P62847 133 aaKnown RBP10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 SLC7A5Q01650 507 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 DLX2Q07687 328 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 ADCY2Q08462 1091 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 SEMA3BQ13214 749 aa10.94□□□□□ -0.66
TNFRSF1A-211ENST00000538363 KLF1Q13351 362 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms