RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 PNMA5Q96PV4 448 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 A0A096LPK6 155 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 FGF10O15520 208 aaPredicted RBP17.13■□□□□ 0.33
SCARB1-205ENST00000538291 CATP04040 527 aaKnown RBP17.13■□□□□ 0.33
SCARB1-205ENST00000538291 ENO2P09104 434 aaPredicted RBP17.13■□□□□ 0.33
SCARB1-205ENST00000538291 PTPN1P18031 435 aaKnown RBP17.13■□□□□ 0.33
SCARB1-205ENST00000538291 UBA1P22314 1058 aaKnown RBP17.13■□□□□ 0.33
SCARB1-205ENST00000538291 GRIK3Q13003 919 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 CELF3Q5SZQ8 465 aaKnown RBP17.13■□□□□ 0.33
SCARB1-205ENST00000538291 KCNT2Q6UVM3 1135 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 CXorf40AQ8TE69 158 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 FAM163AQ96GL9 167 aaPredicted RBP17.13■□□□□ 0.33
SCARB1-205ENST00000538291 QRFPRQ96P65 431 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 PRKAG3Q9UGI9 489 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 GAKO14976 1311 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 E5RJQ4 531 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 VPS4BO75351 444 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 FEN1P39748 380 aaKnown RBP17.13■□□□□ 0.33
SCARB1-205ENST00000538291 MLH1P40692 756 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 CRY1Q16526 586 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 HECTD3Q5T447 861 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 RIPOR1Q6ZS17 1223 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 MTDHQ86UE4 582 aaKnown RBP17.13■□□□□ 0.33
SCARB1-205ENST00000538291 KYQ8NBH2 561 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 FIG4Q92562 907 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 PORCNQ9H237 461 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 RPRD1BQ9NQG5 326 aaKnown RBP17.13■□□□□ 0.33
SCARB1-205ENST00000538291 DLGAP2Q9P1A6 1054 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 PDP2Q9P2J9 529 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 ADAM30Q9UKF2 790 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 ENTPD4Q9Y227 616 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 NDUFAF1Q9Y375 327 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 SF3B1O75533 1304 aaKnown RBP eCLIP17.13■□□□□ 0.331e-6■■■■■ 69.2
SCARB1-205ENST00000538291 NDUFS2O75306 463 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 MIPP30301 263 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 RXRGP48443 463 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 SLC1A6P48664 564 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 TYW3Q6IPR3 259 aaKnown RBP17.13■□□□□ 0.33
SCARB1-205ENST00000538291 CYP20A1Q6UW02 462 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 GLMNQ92990 594 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 ROGDIQ9GZN7 287 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 PIF1Q9H611 641 aa17.13■□□□□ 0.33
SCARB1-205ENST00000538291 SLC15A5A6NIM6 579 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 TALDO1P37837 337 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 INSCQ1MX18 579 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 ZBTB49Q6ZSB9 765 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 UTP15Q8TED0 518 aaKnown RBP17.12■□□□□ 0.33
SCARB1-205ENST00000538291 WNT8BQ93098 351 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 CATSPER2Q96P56 530 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 ASAH2Q9NR71 780 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 ARHGAP28Q9P2N2 729 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 OPTCQ9UBM4 332 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 NAALADL1Q9UQQ1 740 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 USP20Q9Y2K6 914 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 MAGEA13PA6NCF6 341 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 DGKAP23743 735 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 FMO4P31512 558 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 NOS2P35228 1153 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 NUP62P37198 522 aaPredicted RBP17.12■□□□□ 0.33
SCARB1-205ENST00000538291 HPCAL1P37235 193 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 NAB1Q13506 487 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 TBCELQ5QJ74 424 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 MACC1Q6ZN28 852 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 SPATA20Q8TB22 786 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 SLC35C1Q96A29 364 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 APBA2Q99767 749 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 ADI1Q9BV57 179 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 RAD21L1Q9H4I0 556 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 ENOPH1Q9UHY7 261 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 CYP3A4P08684 503 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 RANBP1P43487 201 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 MFSD7Q6UXD7 560 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 TMEM26Q6ZUK4 368 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 MYCBPAPQ8TBZ2 947 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 ASB2Q96Q27 587 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 CCDC189A1A4V9 331 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 NQO1P15559 274 aaKnown RBP17.12■□□□□ 0.33
SCARB1-205ENST00000538291 C4BPBP20851 252 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 SERPINH1P50454 418 aaKnown RBP17.12■□□□□ 0.33
SCARB1-205ENST00000538291 SNRPD1P62314 119 aaKnown RBP17.12■□□□□ 0.33
SCARB1-205ENST00000538291 KPNB1Q14974 876 aaKnown RBP17.12■□□□□ 0.33
SCARB1-205ENST00000538291 SCARA3Q6AZY7 606 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 CASP12Q6UXS9 341 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 CATSPERGQ6ZRH7 1159 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 RBM43Q6ZSC3 357 aaKnown RBP17.12■□□□□ 0.33
SCARB1-205ENST00000538291 FAM126BQ8IXS8 530 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 NACC2Q96BF6 587 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 MRPS26Q9BYN8 205 aaKnown RBP17.12■□□□□ 0.33
SCARB1-205ENST00000538291 NOD2Q9HC29 1040 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 GEMIN8Q9NWZ8 242 aaKnown RBP17.12■□□□□ 0.33
SCARB1-205ENST00000538291 ADPRHL2Q9NX46 363 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 ARL15Q9NXU5 204 aa17.12■□□□□ 0.33
SCARB1-205ENST00000538291 MRPS6P82932 125 aaKnown RBP17.11■□□□□ 0.33
SCARB1-205ENST00000538291 FAM228AQ86W67 206 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 FTHL17Q9BXU8 183 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 DNMT3LQ9UJW3 386 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 MRPS23Q9Y3D9 190 aaKnown RBP17.11■□□□□ 0.33
SCARB1-205ENST00000538291 BCORL1Q5H9F3 1711 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 MEGF6O75095 1541 aa17.11■□□□□ 0.33
SCARB1-205ENST00000538291 RGS14O43566 566 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms