RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 TP53INP2Q8IXH6 220 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 CCDC33Q8N5R6 958 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 ALLCQ8N6M5 410 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 IL17RCQ8NAC3 791 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 DTWD2Q8NBA8 298 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 CYB5D2Q8WUJ1 264 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 MRGPRX3Q96LB0 322 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 C1orf74Q96LT6 269 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 KLC2Q9H0B6 622 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 OSBPL2Q9H1P3 480 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 MTG2Q9H4K7 406 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 MRPL47Q9HD33 250 aaKnown RBP13.49□□□□□ -0.25
CHFR-216ENST00000538235 UVRAGQ9P2Y5 699 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 GGA2Q9UJY4 613 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 USP18Q9UMW8 372 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 ACTL7AQ9Y615 435 aa13.49□□□□□ -0.25
CHFR-216ENST00000538235 A0A0D9SEW6 157 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 A0A1B0GVM2 712 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 TCAF2A6NFQ2 919 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 K7ESF4 209 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 BUB1BO60566 1050 aaPredicted RBP13.48□□□□□ -0.25
CHFR-216ENST00000538235 SRGAP2O75044 1071 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 APODP05090 189 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 RARAP10276 462 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 DRD1P21728 446 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 PRKCHP24723 683 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 TIE1P35590 1138 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 ARHGAP25P42331 645 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 MRE11P49959 708 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 GRSF1Q12849 480 aaKnown RBP eCLIP13.48□□□□□ -0.25
CHFR-216ENST00000538235 TCF15Q12870 199 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 MESDQ14696 234 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 SND1Q7KZF4 910 aaKnown RBP eCLIP13.48□□□□□ -0.25
CHFR-216ENST00000538235 CHST9Q7L1S5 443 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 LRRC8AQ8IWT6 810 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 NPWQ8N729 165 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 ZNF366Q8N895 744 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 FIBINQ8TAL6 211 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 TSC1Q92574 1164 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 XPO6Q96QU8 1125 aaKnown RBP13.48□□□□□ -0.25
CHFR-216ENST00000538235 ZWILCHQ9H900 591 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 PRMT8Q9NR22 394 aaPredicted RBP13.48□□□□□ -0.25
CHFR-216ENST00000538235 ETNK2Q9NVF9 386 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 CACNA2D2Q9NY47 1150 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 OR12D3Q9UGF7 316 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 INTUQ9ULD6 942 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 NUMA1Q14980 2115 aa13.48□□□□□ -0.25
CHFR-216ENST00000538235 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.47□□□□□ -0.25
CHFR-216ENST00000538235 PJA2O43164 708 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 BUB1O43683 1085 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 SNAP91O60641 907 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 CYBBP04839 570 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 GOT1P17174 413 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 L1CAMP32004 1257 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 PCK1P35558 622 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 CYLC1P35663 651 aaPredicted RBP13.47□□□□□ -0.25
CHFR-216ENST00000538235 GJC1P36383 396 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 IL12RB1P42701 662 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 STK19P49842 368 aaPredicted RBP13.47□□□□□ -0.25
CHFR-216ENST00000538235 VAV2P52735 878 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 HADHBP55084 474 aaKnown RBP13.47□□□□□ -0.25
CHFR-216ENST00000538235 MMRN1Q13201 1228 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 ENPP2Q13822 863 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 GSE1Q14687 1217 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 PLEKHG6Q3KR16 790 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 PITRM1Q5JRX3 1037 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 MBLAC2Q68D91 279 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 KIAA1211LQ6NV74 962 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 SUGP1Q8IWZ8 645 aaKnown RBP13.47□□□□□ -0.25
CHFR-216ENST00000538235 TXNDC5Q8NBS9 432 aaKnown RBP13.47□□□□□ -0.25
CHFR-216ENST00000538235 OR7D4Q8NG98 312 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 ZNF830Q96NB3 372 aaPredicted RBP13.47□□□□□ -0.25
CHFR-216ENST00000538235 SLC2A11Q9BYW1 496 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 IRX2Q9BZI1 471 aaPredicted RBP13.47□□□□□ -0.25
CHFR-216ENST00000538235 DHX35Q9H5Z1 703 aaKnown RBP13.47□□□□□ -0.25
CHFR-216ENST00000538235 PCDH18Q9HCL0 1135 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 CD93Q9NPY3 652 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 IP6K2Q9UHH9 426 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 TBC1D30Q9Y2I9 924 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 MRPS17Q9Y2R5 130 aaKnown RBP13.47□□□□□ -0.25
CHFR-216ENST00000538235 STARD13Q9Y3M8 1113 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 RAD54BQ9Y620 910 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 ADGRG1Q9Y653 693 aa13.47□□□□□ -0.25
CHFR-216ENST00000538235 SPAG17Q6Q759 2223 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 A0A1W2PQF6 199 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 TBC1D3BA6NDS4 549 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 CHURC1-FNTBB4DL54 471 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 CREB3O43889 395 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 KLF8O95600 359 aaPredicted RBP13.46□□□□□ -0.25
CHFR-216ENST00000538235 CD160O95971 181 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 HLA-EP13747 358 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 IL4RP24394 825 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 ACVRL1P37023 503 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 CDH4P55283 916 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 GSDMDP57764 484 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 CDH18Q13634 790 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 DPYSQ14117 519 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 LRRC32Q14392 662 aa13.46□□□□□ -0.25
CHFR-216ENST00000538235 PIGHQ14442 188 aaPredicted RBP13.46□□□□□ -0.25
CHFR-216ENST00000538235 ZNF234Q14588 700 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms