RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 INPP5FQ9Y2H2 1132 aa11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 MTO1Q9Y2Z2 717 aaKnown RBP11.71□□□□□ -0.54
SLC28A1-204ENST00000538177 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.7□□□□□ -0.54
SLC28A1-204ENST00000538177 ITGB1P05556 798 aa11.7□□□□□ -0.54
SLC28A1-204ENST00000538177 POLBP06746 335 aa11.7□□□□□ -0.54
SLC28A1-204ENST00000538177 ZNF33AQ06730 810 aa11.7□□□□□ -0.54
SLC28A1-204ENST00000538177 ITGA7Q13683 1181 aa11.7□□□□□ -0.54
SLC28A1-204ENST00000538177 DBN1Q16643 649 aa11.7□□□□□ -0.54
SLC28A1-204ENST00000538177 ATG16L1Q676U5 607 aa11.7□□□□□ -0.54
SLC28A1-204ENST00000538177 KYAT3Q6YP21 454 aaKnown RBP11.7□□□□□ -0.54
SLC28A1-204ENST00000538177 MTDHQ86UE4 582 aaKnown RBP11.7□□□□□ -0.54
SLC28A1-204ENST00000538177 STKLD1Q8NE28 680 aa11.7□□□□□ -0.54
SLC28A1-204ENST00000538177 OR52K1Q8NGK4 314 aa11.7□□□□□ -0.54
SLC28A1-204ENST00000538177 HASPINQ8TF76 798 aa11.7□□□□□ -0.54
SLC28A1-204ENST00000538177 INPP5DQ92835 1189 aa11.7□□□□□ -0.54
SLC28A1-204ENST00000538177 E2F7Q96AV8 911 aa11.7□□□□□ -0.54
SLC28A1-204ENST00000538177 C7orf26Q96N11 449 aa11.7□□□□□ -0.54
SLC28A1-204ENST00000538177 TMEM237Q96Q45 408 aa11.7□□□□□ -0.54
SLC28A1-204ENST00000538177 LRRC40Q9H9A6 602 aa11.7□□□□□ -0.54
SLC28A1-204ENST00000538177 ARHGEF38Q9NXL2 777 aa11.7□□□□□ -0.54
SLC28A1-204ENST00000538177 TMEM88BA6NKF7 163 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 TRAFD1O14545 582 aaPredicted RBP11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 DNAJC6O75061 913 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 ALDOAP04075 364 aaKnown RBP11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 MYCNP04198 464 aaPredicted RBP11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 BPGMP07738 259 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 PRKAR2AP13861 404 aaKnown RBP11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 ARFIP2P53365 341 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 ZBTB17Q13105 803 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 CTC1Q2NKJ3 1217 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 TAF1BQ53T94 588 aaPredicted RBP11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 SWT1Q5T5J6 900 aaKnown RBP11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 ITPRIPL1Q6GPH6 555 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 CLNKQ7Z7G1 428 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 TMEM135Q86UB9 458 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 NUDCD3Q8IVD9 361 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 KLHDC8BQ8IXV7 354 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 SCAMP5Q8TAC9 235 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 RNF34Q969K3 372 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 SLC7A6OSQ96CW6 309 aaPredicted RBP11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 TEKT5Q96M29 485 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 HAPLN3Q96S86 360 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 MECRQ9BV79 373 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 NOD2Q9HC29 1040 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 TRMT13Q9NUP7 481 aaKnown RBP11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 BFARQ9NZS9 450 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 SLC17A6Q9P2U8 582 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 ZFP69BQ9UJL9 534 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 PCDHB8Q9UN66 801 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 PSAT1Q9Y617 370 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 RPS6KL1Q9Y6S9 549 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 TDRD15B5MCY1 1934 aaKnown RBP11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 NUP205Q92621 2012 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 A0A0G2JND7 137 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 TNFRSF10BO14763 440 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 IRAK2O43187 625 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 CABYRO75952 493 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 IBSPP21815 317 aaPredicted RBP11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 YY1P25490 414 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 TARSP26639 723 aaKnown RBP11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 CAP1Q01518 475 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 OCRLQ01968 901 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 BST1Q10588 318 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 OLIG2Q13516 323 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 BRMS1LQ5PSV4 323 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 C4orf50Q6ZRC1 276 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 CERS2Q96G23 380 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 FCRL3Q96P31 734 aaPredicted RBP11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 AGAP3Q96P47 875 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 TSGA13Q96PP4 275 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 RAB3IPQ96QF0 476 aaPredicted RBP11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 MLPHQ9BV36 600 aaPredicted RBP11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 TMEM120AQ9BXJ8 343 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 CD248Q9HCU0 757 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 ABCC13Q9NSE7 274 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 HEY2Q9UBP5 337 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 BAIAP2L1Q9UHR4 511 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 HAO1Q9UJM8 370 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 VANGL2Q9ULK5 521 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 NEU3Q9UQ49 428 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 NOD1Q9Y239 953 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 NUMBLQ9Y6R0 609 aa11.69□□□□□ -0.54
SLC28A1-204ENST00000538177 MAGEB16A2A368 324 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 F8W810 466 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 CACNG3O60359 315 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 HNRNPCL1O60812 293 aaKnown RBP11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 SNNO75324 88 aaPredicted RBP11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 ALDH1A1P00352 501 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 GSRP00390 522 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 ITGA2BP08514 1039 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 HOXC13P31276 330 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 HTR7P34969 479 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 GP5P40197 560 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 NPY2RP49146 381 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 RASSF2P50749 326 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 COG7P83436 770 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 TMPRSS15P98073 1019 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 CDK18Q07002 472 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 CHI3L2Q15782 390 aa11.68□□□□□ -0.54
SLC28A1-204ENST00000538177 CES4AQ5XG92 561 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms