RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 NEK3P51956 506 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 GJA9P57773 515 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 DAOAP59103 153 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 MAXP61244 160 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 IRF9Q00978 393 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 WASHC5Q12768 1159 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 ZBTB17Q13105 803 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 DDR2Q16832 855 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 NOMO2Q5JPE7 1267 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 STRADAQ7RTN6 431 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 ZNF467Q7Z7K2 595 aaPredicted RBP8.92□□□□□ -0.98
UBE3B-208ENST00000538070 TAC4Q86UU9 113 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 DCLK2Q8N568 766 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 CCNYL1Q8N7R7 359 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 SLC7A6OSQ96CW6 309 aaPredicted RBP8.92□□□□□ -0.98
UBE3B-208ENST00000538070 PABPC5Q96DU9 382 aaKnown RBP8.92□□□□□ -0.98
UBE3B-208ENST00000538070 FCRL3Q96P31 734 aaPredicted RBP8.92□□□□□ -0.98
UBE3B-208ENST00000538070 EPAS1Q99814 870 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 KATNAL1Q9BW62 490 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 COLEC11Q9BWP8 271 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 PPCSQ9HAB8 311 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 TMLHEQ9NVH6 421 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 TMEM216Q9P0N5 145 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 C2CD2LO14523 706 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 DGKIO75912 1065 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 AKR1A1P14550 325 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 PTPN3P26045 913 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 PBX3P40426 434 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 CCR10P46092 362 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 FLT3LGP49771 235 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 CDK16Q00536 496 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 CRHR2Q13324 411 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 CTBP1Q13363 440 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 PDE1CQ14123 709 aaPredicted RBP8.92□□□□□ -0.98
UBE3B-208ENST00000538070 CES4AQ5XG92 561 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 AGMOQ6ZNB7 445 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 ZMIZ2Q8NF64 920 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 STK32AQ8WU08 396 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 PPP1R12CQ9BZL4 782 aa8.92□□□□□ -0.98
UBE3B-208ENST00000538070 WDR90Q96KV7 1748 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 HMX2A2RU54 273 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 MBLAC1A4D2B0 266 aaPredicted RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 E9PBE3 544 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 KLHL41O60662 606 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 DAB1O75553 588 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 KRT36O76013 467 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 HSPA4LO95757 839 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 CHRNA1P02708 482 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 FYNP06241 537 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 PTPN4P29074 926 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 FDFT1P37268 417 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 PGFP49763 221 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 GSCP56915 257 aaPredicted RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 THOC5Q13769 683 aaKnown RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 PRKD1Q15139 912 aaPredicted RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 OVOS1Q6IE37 1185 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 ACVR1CQ8NER5 493 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 EXT2Q93063 718 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 NPY6RQ99463 290 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 DHRS4Q9BTZ2 278 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 CADM1Q9BY67 442 aaKnown RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 OXCT2Q9BYC2 517 aaPredicted RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 GDAP2Q9NXN4 497 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 MTO1Q9Y2Z2 717 aaKnown RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 TRPV2Q9Y5S1 764 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 OTOFQ9HC10 1997 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 RGPD3A6NKT7 1758 aaPredicted RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 RGPD4Q7Z3J3 1758 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 LOC102724159A0A0B4J2E5 919 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 PRR5-ARHGAP8B1AHC4 643 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 OPHN1O60890 802 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 ALDOAP04075 364 aaKnown RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 GM2AP17900 193 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 AXLP30530 894 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 ETV4P43268 484 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 CXCR3P49682 368 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 GPR15P49685 360 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 ARHGAP8P85298 464 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 PWP2Q15269 919 aaKnown RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 RCN1Q15293 331 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 MUM1Q2TAK8 710 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 SLC39A12Q504Y0 691 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 SPATA2LQ8IUW3 424 aaPredicted RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 PLD6Q8N2A8 252 aaKnown RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 TOP6BLQ8N6T0 577 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 CERS2Q96G23 380 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 MIPEPQ99797 713 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 OMDQ99983 421 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 TASP1Q9H6P5 420 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 BRCA1P38398 1863 aaKnown RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 NT5C1B-RDH14C9J2C7 533 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 TRDMT1O14717 391 aaKnown RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 MGEA5O60502 916 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 CCDC22O60826 627 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 VAPBO95292 243 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 STAU1O95793 577 aaKnown RBP8.91□□□□□ -0.98
UBE3B-208ENST00000538070 TBX18O95935 607 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 MT-CO1P00395 513 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 ASGR1P07306 291 aa8.91□□□□□ -0.98
UBE3B-208ENST00000538070 KCNE1P15382 129 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms