RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 DRAP1Q14919 205 aaPredicted RBP8.66□□□□□ -1.02
DDB1-208ENST00000537120 SUZ12Q15022 739 aaKnown RBP8.66□□□□□ -1.02
DDB1-208ENST00000537120 TRIP6Q15654 476 aaKnown RBP8.66□□□□□ -1.02
DDB1-208ENST00000537120 PTPRNQ16849 979 aa8.66□□□□□ -1.02
DDB1-208ENST00000537120 FSCBQ5H9T9 825 aa8.66□□□□□ -1.02
DDB1-208ENST00000537120 PITRM1Q5JRX3 1037 aa8.66□□□□□ -1.02
DDB1-208ENST00000537120 IL27RAQ6UWB1 636 aa8.66□□□□□ -1.02
DDB1-208ENST00000537120 MMS22LQ6ZRQ5 1243 aa8.66□□□□□ -1.02
DDB1-208ENST00000537120 FAM183BPQ6ZVS7 135 aa8.66□□□□□ -1.02
DDB1-208ENST00000537120 SLC47A2Q86VL8 602 aa8.66□□□□□ -1.02
DDB1-208ENST00000537120 ERICH1Q86X53 443 aa8.66□□□□□ -1.02
DDB1-208ENST00000537120 MMAAQ8IVH4 418 aaKnown RBP8.66□□□□□ -1.02
DDB1-208ENST00000537120 WDTC1Q8N5D0 677 aa8.66□□□□□ -1.02
DDB1-208ENST00000537120 TMEM35BQ8NCS4 154 aa8.66□□□□□ -1.02
DDB1-208ENST00000537120 MSANTD4Q8NCY6 345 aa8.66□□□□□ -1.02
DDB1-208ENST00000537120 C1orf131Q8NDD1 294 aaKnown RBP8.66□□□□□ -1.02
DDB1-208ENST00000537120 SKA1Q96BD8 255 aa8.66□□□□□ -1.02
DDB1-208ENST00000537120 RPL10LQ96L21 214 aaKnown RBP8.66□□□□□ -1.02
DDB1-208ENST00000537120 RPRD1AQ96P16 312 aaPredicted RBP8.66□□□□□ -1.02
DDB1-208ENST00000537120 CPXM1Q96SM3 734 aa8.66□□□□□ -1.02
DDB1-208ENST00000537120 PCED1AQ9H1Q7 454 aa8.66□□□□□ -1.02
DDB1-208ENST00000537120 C6orf106Q9H6K1 298 aaPredicted RBP8.66□□□□□ -1.02
DDB1-208ENST00000537120 GAREM1Q9H706 876 aa8.66□□□□□ -1.02
DDB1-208ENST00000537120 PLCB1Q9NQ66 1216 aa8.66□□□□□ -1.02
DDB1-208ENST00000537120 ASNSD1Q9NWL6 643 aa8.66□□□□□ -1.02
DDB1-208ENST00000537120 XPO7Q9UIA9 1087 aaKnown RBP8.66□□□□□ -1.02
DDB1-208ENST00000537120 SCML1Q9UN30 329 aa8.66□□□□□ -1.02
DDB1-208ENST00000537120 PCDHGC3Q9UN70 934 aa8.66□□□□□ -1.02
DDB1-208ENST00000537120 EDDM13A0A1B0GTR0 161 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 A0A1B0GVT2 93 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 FAM170AA1A519 330 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 UPK3BL1B0FP48 263 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 UPK3BL2E5RIL1 263 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 BNIP3LO60238 219 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 RNASEH2AO75792 299 aaKnown RBP8.65□□□□□ -1.02
DDB1-208ENST00000537120 KRT37O76014 449 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 CER1O95813 267 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 IL1BP01584 269 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 SPINK2P20155 84 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 SLC8A1P32418 973 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 CLCN1P35523 988 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 CTSOP43234 321 aaPredicted RBP8.65□□□□□ -1.02
DDB1-208ENST00000537120 NUMBP49757 651 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 AFF3P51826 1226 aaKnown RBP8.65□□□□□ -1.02
DDB1-208ENST00000537120 C21orf59P57076 290 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 SLC12A1Q13621 1099 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 HLA-BQ31612 363 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 HNRNPA1L2Q32P51 320 aaKnown RBP8.65□□□□□ -1.02
DDB1-208ENST00000537120 DPCR1Q3MIW9 517 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 CT47A1Q5JQC4 288 aaPredicted RBP8.65□□□□□ -1.02
DDB1-208ENST00000537120 TTC39BQ5VTQ0 682 aaPredicted RBP8.65□□□□□ -1.02
DDB1-208ENST00000537120 TAF3Q5VWG9 929 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 LRRC31Q6UY01 552 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 DSG4Q86SJ6 1040 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 PIP4P1Q86T03 277 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 APCDD1Q8J025 514 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 CCAR2Q8N163 923 aaKnown RBP8.65□□□□□ -1.02
DDB1-208ENST00000537120 ANKRD20A12PQ8NF67 263 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 RHBDD1Q8TEB9 315 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 C18orf8Q96DM3 657 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 MYEOVQ96EZ4 313 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 PRICKLE1Q96MT3 831 aaPredicted RBP8.65□□□□□ -1.02
DDB1-208ENST00000537120 VPS16Q9H269 839 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 PABPC3Q9H361 631 aaKnown RBP8.65□□□□□ -1.02
DDB1-208ENST00000537120 WDCPQ9H6R7 721 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 DNAAF2Q9NVR5 837 aaKnown RBP8.65□□□□□ -1.02
DDB1-208ENST00000537120 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.65□□□□□ -1.02
DDB1-208ENST00000537120 SLCO3A1Q9UIG8 710 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 SLC25A13Q9UJS0 675 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 INTS6Q9UL03 887 aaKnown RBP8.65□□□□□ -1.02
DDB1-208ENST00000537120 VANGL2Q9ULK5 521 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 STAP1Q9ULZ2 295 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 NFE2L3Q9Y4A8 694 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 PAXBP1Q9Y5B6 917 aa8.65□□□□□ -1.02
DDB1-208ENST00000537120 CACNA1EQ15878 2313 aa8.65□□□□□ -1.03
DDB1-208ENST00000537120 LAMA1P25391 3075 aa8.65□□□□□ -1.03
DDB1-208ENST00000537120 MAP1BP46821 2468 aaKnown RBP8.64□□□□□ -1.03
DDB1-208ENST00000537120 TBC1D3DA0A087WVF3 549 aa8.64□□□□□ -1.03
DDB1-208ENST00000537120 TBC1D3IA0A087WXS9 549 aa8.64□□□□□ -1.03
DDB1-208ENST00000537120 TBC1D3EA0A087X179 549 aa8.64□□□□□ -1.03
DDB1-208ENST00000537120 TBC1D3KA0A087X1G2 549 aa8.64□□□□□ -1.03
DDB1-208ENST00000537120 A0A1B0GVM2 712 aa8.64□□□□□ -1.03
DDB1-208ENST00000537120 A0A1W2PP55 124 aa8.64□□□□□ -1.03
DDB1-208ENST00000537120 TBC1D3FA6NER0 549 aaPredicted RBP8.64□□□□□ -1.03
DDB1-208ENST00000537120 TCAF2A6NFQ2 919 aa8.64□□□□□ -1.03
DDB1-208ENST00000537120 GOLGA8CPA6NN73 597 aa8.64□□□□□ -1.03
DDB1-208ENST00000537120 TBC1D3LB9A6J9 549 aa8.64□□□□□ -1.03
DDB1-208ENST00000537120 GOLGA6L22H0YM25 854 aa8.64□□□□□ -1.03
DDB1-208ENST00000537120 GOLGA8SH3BPF8 625 aa8.64□□□□□ -1.03
DDB1-208ENST00000537120 MID1O15344 667 aa8.64□□□□□ -1.03
DDB1-208ENST00000537120 HYAL3O43820 417 aaPredicted RBP8.64□□□□□ -1.03
DDB1-208ENST00000537120 TRIM16O95361 564 aa8.64□□□□□ -1.03
DDB1-208ENST00000537120 TOP3BO95985 862 aaKnown RBP8.64□□□□□ -1.03
DDB1-208ENST00000537120 F9P00740 461 aa8.64□□□□□ -1.03
DDB1-208ENST00000537120 IGLV3-19P01714 112 aa8.64□□□□□ -1.03
DDB1-208ENST00000537120 ERBB2P04626 1255 aa8.64□□□□□ -1.03
DDB1-208ENST00000537120 TBC1D3HP0C7X1 549 aa8.64□□□□□ -1.03
DDB1-208ENST00000537120 PNMA6AP0CW24 399 aaPredicted RBP8.64□□□□□ -1.03
DDB1-208ENST00000537120 CD59P13987 128 aa8.64□□□□□ -1.03
DDB1-208ENST00000537120 EEF1GP26641 437 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms