RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 BTBD19C9JJ37 291 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 UBE2Q2LH0YL09 131 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 H7C1Q1 480 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 DSCR3O14972 297 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 TULP3O75386 442 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 ENO1P06733 434 aaKnown RBP5.91□□□□□ -1.46
PRKDC-208ENST00000536710 PKMP14618 531 aaKnown RBP5.91□□□□□ -1.46
PRKDC-208ENST00000536710 ATF7P17544 494 aaPredicted RBP5.91□□□□□ -1.46
PRKDC-208ENST00000536710 AVPR2P30518 371 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 CCT4P50991 539 aaKnown RBP5.91□□□□□ -1.46
PRKDC-208ENST00000536710 CAMK1Q14012 370 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 TSTQ16762 297 aaKnown RBP5.91□□□□□ -1.46
PRKDC-208ENST00000536710 AP5B1Q2VPB7 878 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 ANXA2RQ3ZCQ2 193 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 HAUS3Q68CZ6 603 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 MTFR2Q6P444 385 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 RANBP10Q6VN20 620 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 R3HCC1LQ7Z5L2 792 aaKnown RBP5.91□□□□□ -1.46
PRKDC-208ENST00000536710 TMEM200AQ86VY9 491 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 LSM14AQ8ND56 463 aaKnown RBP5.91□□□□□ -1.46
PRKDC-208ENST00000536710 RUFY2Q8WXA3 655 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 KIF1BPQ96EK5 621 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 FUZQ9BT04 418 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 DUSP26Q9BV47 211 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 PDCL3Q9H2J4 239 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 TTYH1Q9H313 450 aaPredicted RBP5.91□□□□□ -1.46
PRKDC-208ENST00000536710 ALG13Q9NP73 1137 aaKnown RBP5.91□□□□□ -1.46
PRKDC-208ENST00000536710 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.91□□□□□ -1.46
PRKDC-208ENST00000536710 ARL15Q9NXU5 204 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 SEMA5BQ9P283 1151 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 ORC3Q9UBD5 711 aaPredicted RBP5.91□□□□□ -1.46
PRKDC-208ENST00000536710 CD207Q9UJ71 328 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 PACSIN3Q9UKS6 424 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 CNPY2Q9Y2B0 182 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 HS3ST3A1Q9Y663 406 aa5.91□□□□□ -1.46
PRKDC-208ENST00000536710 A0A1W2PPH5 198 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 TCRBV5S1A1TA0A578 114 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 C16orf96A6NNT2 1141 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 ARSAP15289 507 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 GPD1P21695 349 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 TGM2P21980 687 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 GPD2P43304 727 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 ZNF84P51523 738 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 CCR9P51686 369 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 MVDP53602 400 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 OAZ1P54368 228 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 EIF5P55010 431 aaKnown RBP5.9□□□□□ -1.46
PRKDC-208ENST00000536710 CDH15P55291 814 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 DMWDQ09019 674 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 BYSLQ13895 437 aaKnown RBP5.9□□□□□ -1.46
PRKDC-208ENST00000536710 ARL13AQ5H913 290 aaPredicted RBP5.9□□□□□ -1.46
PRKDC-208ENST00000536710 SH2D4BQ5SQS7 431 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 RNF144BQ7Z419 303 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 BRSK2Q8IWQ3 736 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 TDRD7Q8NHU6 1098 aaKnown RBP5.9□□□□□ -1.46
PRKDC-208ENST00000536710 RFWD2Q8NHY2 731 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 NOC3LQ8WTT2 800 aaKnown RBP5.9□□□□□ -1.46
PRKDC-208ENST00000536710 SH3KBP1Q96B97 665 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 ZNF764Q96H86 408 aaPredicted RBP5.9□□□□□ -1.46
PRKDC-208ENST00000536710 C7orf26Q96N11 449 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 BLOC1S4Q9NUP1 217 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 GAR1Q9NY12 217 aaKnown RBP5.9□□□□□ -1.46
PRKDC-208ENST00000536710 TLK1Q9UKI8 766 aa5.9□□□□□ -1.46
PRKDC-208ENST00000536710 TARM1B6A8C7 271 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 MCIDASD6RGH6 385 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 MATN3O15232 486 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 GCP02774 474 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 RFPL3SP0C7P2 107 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 HOXB9P17482 250 aaPredicted RBP5.89□□□□□ -1.47
PRKDC-208ENST00000536710 HNF1BP35680 557 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 CACNA2D1P54289 1103 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 SEC23BQ15437 767 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 CERKLQ49MI3 558 aaPredicted RBP5.89□□□□□ -1.47
PRKDC-208ENST00000536710 GPATCH4Q5T3I0 446 aaKnown RBP5.89□□□□□ -1.47
PRKDC-208ENST00000536710 CRIP3Q6Q6R5 217 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 GALNT7Q86SF2 657 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 UEVLDQ8IX04 471 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 PNLDC1Q8NA58 520 aaKnown RBP5.89□□□□□ -1.47
PRKDC-208ENST00000536710 C2CD4CQ8TF44 421 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 NCSTNQ92542 709 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 REPS1Q96D71 796 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 ELP4Q96EB1 424 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 ADAD1Q96M93 576 aaKnown RBP5.89□□□□□ -1.47
PRKDC-208ENST00000536710 UROC1Q96N76 676 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 EYA3Q99504 573 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 MPHOSPH8Q99549 860 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 PRRX2Q99811 253 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 KRTAP4-12Q9BQ66 201 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 SLC25A18Q9H1K4 315 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 KRT84Q9NSB2 600 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 ADAM21Q9UKJ8 722 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 MAFFQ9ULX9 164 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 PKP3Q9Y446 797 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 WNT6Q9Y6F9 365 aa5.89□□□□□ -1.47
PRKDC-208ENST00000536710 A0A087X0M5 115 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 A0A1B0GX30 115 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 FAM90A7PA6NKC0 464 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 FAM90A22PA8MWA6 464 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 FAM90A12PA8MX19 464 aa5.88□□□□□ -1.47
PRKDC-208ENST00000536710 FAM90A23PA8MXZ1 464 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms