RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 PRKCBP05771 671 aa6.28□□□□□ -1.4
CLIP1-207ENST00000536634 RPL17P18621 184 aaKnown RBP6.28□□□□□ -1.4
CLIP1-207ENST00000536634 IL1R2P27930 398 aa6.28□□□□□ -1.4
CLIP1-207ENST00000536634 PSG6Q00889 435 aa6.28□□□□□ -1.4
CLIP1-207ENST00000536634 TIAL1Q01085 375 aaKnown RBP eCLIP6.28□□□□□ -1.4
CLIP1-207ENST00000536634 PPATQ06203 517 aa6.28□□□□□ -1.4
CLIP1-207ENST00000536634 FOXF2Q12947 444 aa6.28□□□□□ -1.4
CLIP1-207ENST00000536634 STK3Q13188 491 aa6.28□□□□□ -1.4
CLIP1-207ENST00000536634 KCNAB1Q14722 419 aa6.28□□□□□ -1.4
CLIP1-207ENST00000536634 COBLL1Q53SF7 1204 aa6.28□□□□□ -1.4
CLIP1-207ENST00000536634 PLAG1Q6DJT9 500 aa6.28□□□□□ -1.4
CLIP1-207ENST00000536634 KSR2Q6VAB6 950 aa6.28□□□□□ -1.4
CLIP1-207ENST00000536634 C8orf58Q8NAV2 365 aa6.28□□□□□ -1.4
CLIP1-207ENST00000536634 RSPRY1Q96DX4 576 aa6.28□□□□□ -1.4
CLIP1-207ENST00000536634 SARGQ9BW04 601 aa6.28□□□□□ -1.4
CLIP1-207ENST00000536634 VN1R3Q9BXE9 311 aa6.28□□□□□ -1.4
CLIP1-207ENST00000536634 TBC1D23Q9NUY8 699 aa6.28□□□□□ -1.4
CLIP1-207ENST00000536634 LPAR3Q9UBY5 353 aa6.28□□□□□ -1.4
CLIP1-207ENST00000536634 PFASO15067 1338 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 PLXNB2O15031 1838 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 AK9Q5TCS8 1911 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 TISP43B9A030 160 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 APAF1O14727 1248 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 KPNA5O15131 536 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 PMPCBO75439 489 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 DDX58O95786 925 aaKnown RBP6.27□□□□□ -1.41
CLIP1-207ENST00000536634 DLDP09622 509 aaKnown RBP6.27□□□□□ -1.41
CLIP1-207ENST00000536634 TPH1P17752 444 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 EPHA3P29320 983 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 GKP32189 559 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 GYG1P46976 350 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 TIRAPP58753 221 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 DAG1Q14118 895 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 GCKRQ14397 625 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 TBC1D25Q3MII6 688 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 RNASE12Q5GAN4 147 aaKnown RBP6.27□□□□□ -1.41
CLIP1-207ENST00000536634 KIRREL2Q6UWL6 708 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 TRIM72Q6ZMU5 477 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 G2E3Q7L622 706 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 SRRM1Q8IYB3 904 aaKnown RBP6.27□□□□□ -1.41
CLIP1-207ENST00000536634 TSPYL6Q8N831 410 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 SEMA6DQ8NFY4 1073 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 TDRD7Q8NHU6 1098 aaKnown RBP6.27□□□□□ -1.41
CLIP1-207ENST00000536634 WDYHV1Q96HA8 205 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 PARK7Q99497 189 aaKnown RBP6.27□□□□□ -1.41
CLIP1-207ENST00000536634 UNKQ9C0B0 810 aaKnown RBP6.27□□□□□ -1.41
CLIP1-207ENST00000536634 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.27□□□□□ -1.41
CLIP1-207ENST00000536634 WDR26Q9H7D7 661 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 ZNF212Q9UDV6 495 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 USP22Q9UPT9 525 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 RPAP1Q9BWH6 1393 aaPredicted RBP6.27□□□□□ -1.41
CLIP1-207ENST00000536634 PHIPQ8WWQ0 1821 aa6.27□□□□□ -1.41
CLIP1-207ENST00000536634 USP34Q70CQ2 3546 aa6.26□□□□□ -1.41
CLIP1-207ENST00000536634 ANKRD18BA2A2Z9 1011 aa6.26□□□□□ -1.41
CLIP1-207ENST00000536634 TNPO2O14787 897 aaKnown RBP6.26□□□□□ -1.41
CLIP1-207ENST00000536634 PLIN1O60240 522 aa6.26□□□□□ -1.41
CLIP1-207ENST00000536634 PARP1P09874 1014 aaKnown RBP6.26□□□□□ -1.41
CLIP1-207ENST00000536634 NTSR1P30989 418 aa6.26□□□□□ -1.41
CLIP1-207ENST00000536634 PGDP52209 483 aa6.26□□□□□ -1.41
CLIP1-207ENST00000536634 HOXA4Q00056 320 aaPredicted RBP6.26□□□□□ -1.41
CLIP1-207ENST00000536634 ZNF543Q08ER8 600 aa6.26□□□□□ -1.41
CLIP1-207ENST00000536634 PRAMEF17Q5VTA0 474 aa6.26□□□□□ -1.41
CLIP1-207ENST00000536634 KLHDC7AQ5VTJ3 777 aa6.26□□□□□ -1.41
CLIP1-207ENST00000536634 FAM109BQ6ICB4 259 aaPredicted RBP6.26□□□□□ -1.41
CLIP1-207ENST00000536634 APOBEC3HQ6NTF7 200 aaKnown RBP6.26□□□□□ -1.41
CLIP1-207ENST00000536634 ZNF66Q6ZN08 573 aa6.26□□□□□ -1.41
CLIP1-207ENST00000536634 LIX1LQ8IVB5 337 aa6.26□□□□□ -1.41
CLIP1-207ENST00000536634 MAFAQ8NHW3 353 aaPredicted RBP6.26□□□□□ -1.41
CLIP1-207ENST00000536634 CTHRC1Q96CG8 243 aa6.26□□□□□ -1.41
CLIP1-207ENST00000536634 C11orf49Q9H6J7 331 aa6.26□□□□□ -1.41
CLIP1-207ENST00000536634 ZNF112Q9UJU3 913 aa6.26□□□□□ -1.41
CLIP1-207ENST00000536634 RIMKLBQ9ULI2 386 aa6.26□□□□□ -1.41
CLIP1-207ENST00000536634 MAST2Q6P0Q8 1798 aa6.26□□□□□ -1.41
CLIP1-207ENST00000536634 LTBP2Q14767 1821 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 TRANK1O15050 2925 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 AQP7P3A6NL99 342 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 PSMD9O00233 223 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 CES2O00748 559 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 SPRY2O43597 315 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 EXOC3O60645 756 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 IL18RAPO95256 599 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 ANXA2P07355 339 aaKnown RBP6.25□□□□□ -1.41
CLIP1-207ENST00000536634 TRIM27P14373 513 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 GNALP38405 381 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 GATMP50440 423 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 SRSF4Q08170 494 aaKnown RBP6.25□□□□□ -1.41
CLIP1-207ENST00000536634 NEXNQ0ZGT2 675 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 EPHA10Q5JZY3 1008 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 CCDC30Q5VVM6 783 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 RRAGBQ5VZM2 374 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 CHSY1Q86X52 802 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 METTL25Q8N6Q8 603 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 SIRT6Q8N6T7 355 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 TERB1Q8NA31 727 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 DAZAP1Q96EP5 407 aaKnown RBP6.25□□□□□ -1.41
CLIP1-207ENST00000536634 FAM84BQ96KN1 310 aaPredicted RBP6.25□□□□□ -1.41
CLIP1-207ENST00000536634 MMS19Q96T76 1030 aa6.25□□□□□ -1.41
CLIP1-207ENST00000536634 CDX2Q99626 313 aaPredicted RBP6.25□□□□□ -1.41
CLIP1-207ENST00000536634 INO80BQ9C086 356 aaPredicted RBP6.25□□□□□ -1.41
CLIP1-207ENST00000536634 CIPCQ9C0C6 399 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms