RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-206	ENST00000536429	ATMIN	O43313	823 aa	Predicted RBP	13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	SYNCRIP	O60506	623 aa	Known RBP	13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	F9	P00740	461 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	CCDC172	P0C7W6	258 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	SDC4	P31431	198 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	PRKCI	P41743	596 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	HDAC4	P56524	1084 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	RPL7A	P62424	266 aa	Known RBP	13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	C1QBP	Q07021	282 aa	Known RBP	13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	PLEKHG6	Q3KR16	790 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	C5orf22	Q49AR2	442 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	FIGN	Q5HY92	759 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	PPP1R15B	Q5SWA1	713 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	DNAJC24	Q6P3W2	148 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	LRSAM1	Q6UWE0	723 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.57	□□□□□ -0.24	4e-9	■■■□□ 18.4
PRKDC-206	ENST00000536429	ARMCX6	Q7L4S7	300 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	TMEFF1	Q8IYR6	380 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	DEFB119	Q8N690	84 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	RNF214	Q8ND24	703 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	ALG14	Q96F25	216 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	SELENOO	Q9BVL4	669 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	XPO4	Q9C0E2	1151 aa	Known RBP	13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	TSPY26P	Q9H489	355 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	SEMA4G	Q9NTN9	838 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	MPP6	Q9NZW5	540 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	PLA2G4C	Q9UP65	541 aa		13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.57	□□□□□ -0.24
PRKDC-206	ENST00000536429	SIGLEC16	A6NMB1	481 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	TTC34	A8MYJ7	566 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	RHOBTB1	O94844	696 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	GYPC	P04921	128 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	ATP5B	P06576	529 aa	Known RBP	13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	PTGER3	P43115	390 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	PTPN9	P43378	593 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	STK19	P49842	368 aa	Predicted RBP	13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	OGDH	Q02218	1023 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	KLHL30	Q0D2K2	578 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	CAMK2G	Q13555	558 aa	Predicted RBP	13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	SF3A2	Q15428	464 aa	Known RBP	13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	ELF2	Q15723	593 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	HGSNAT	Q68CP4	663 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	TCEAL6	Q6IPX3	200 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	TMPRSS6	Q8IU80	811 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	CCDC185	Q8N715	623 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	ZNF557	Q8N988	423 aa	Predicted RBP	13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	FAM172A	Q8WUF8	416 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	CPLX3	Q8WVH0	158 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	CENPI	Q92674	756 aa	Predicted RBP	13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	TCEAL3	Q969E4	200 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	LOXL4	Q96JB6	756 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	SPACA7	Q96KW9	195 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	RPL10L	Q96L21	214 aa	Known RBP	13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	MCEE	Q96PE7	176 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	EDEM3	Q9BZQ6	932 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	PRDM16	Q9HAZ2	1276 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	PRSS16	Q9NQE7	514 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	SLCO3A1	Q9UIG8	710 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	ERVW-1	Q9UQF0	538 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	OR51B4	Q9Y5P0	310 aa		13.56	□□□□□ -0.24
PRKDC-206	ENST00000536429	MUC22	E2RYF6	1773 aa	Predicted RBP	13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	GON4L	Q3T8J9	2241 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	IGLV3-10	A0A075B6K4	115 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429		A0A1W2PQJ5	194 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	DRGX	A6NNA5	263 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429		E9PAM4	449 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	FAM72C	H0Y354	149 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	CCP110	O43303	1012 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	SRGAP2	O75044	1071 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	PLEK	P08567	350 aa	Predicted RBP	13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	GPD1	P21695	349 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	MPL	P40238	635 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	DHPS	P49366	369 aa	Predicted RBP	13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	CREB5	Q02930	508 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	MTA1	Q13330	715 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	PLA2G2C	Q5R387	149 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	FAM72A	Q5TYM5	149 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	FAM72D	Q6L9T8	149 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	TFAP2D	Q7Z6R9	452 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	FAM72B	Q86X60	149 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	OR2T3	Q8NH03	318 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	SIPA1	Q96FS4	1042 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	C1orf74	Q96LT6	269 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	HAPLN3	Q96S86	360 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	NUP58	Q9BVL2	599 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	TRIM7	Q9C029	511 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	RXFP3	Q9NSD7	469 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	USP36	Q9P275	1121 aa	Known RBP	13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	ZNF212	Q9UDV6	495 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	CAPN11	Q9UMQ6	739 aa		13.55	□□□□□ -0.24
PRKDC-206	ENST00000536429	SPAG17	Q6Q759	2223 aa		13.54	□□□□□ -0.24
PRKDC-206	ENST00000536429	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.54	□□□□□ -0.24
PRKDC-206	ENST00000536429	BCLAF3	A2AJT9	711 aa	Known RBP	13.54	□□□□□ -0.24
PRKDC-206	ENST00000536429	ZBTB24	O43167	697 aa	Predicted RBP	13.54	□□□□□ -0.24
PRKDC-206	ENST00000536429	MAP3K13	O43283	966 aa		13.54	□□□□□ -0.24
PRKDC-206	ENST00000536429	GDF9	O60383	454 aa		13.54	□□□□□ -0.24
PRKDC-206	ENST00000536429	LRP3	O75074	770 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms