RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 FNDC3BQ53EP0 1204 aaKnown RBP16.92■□□□□ 0.3
ATL3-202ENST00000535789 PEAR1Q5VY43 1037 aaPredicted RBP16.92■□□□□ 0.3
ATL3-202ENST00000535789 C11orf74Q86VG3 221 aa16.92■□□□□ 0.3
ATL3-202ENST00000535789 NCOR2Q9Y618 2525 aa16.92■□□□□ 0.3
ATL3-202ENST00000535789 LNP1A1A4G5 178 aa16.91■□□□□ 0.3
ATL3-202ENST00000535789 TIMM44O43615 452 aa16.91■□□□□ 0.3
ATL3-202ENST00000535789 ABCB4P21439 1286 aa16.91■□□□□ 0.3
ATL3-202ENST00000535789 ITPKAP23677 461 aa16.91■□□□□ 0.3
ATL3-202ENST00000535789 MZF1P28698 734 aaPredicted RBP16.91■□□□□ 0.3
ATL3-202ENST00000535789 STK19P49842 368 aaPredicted RBP16.91■□□□□ 0.3
ATL3-202ENST00000535789 GSCP56915 257 aaPredicted RBP16.91■□□□□ 0.3
ATL3-202ENST00000535789 RPL6Q02878 288 aaKnown RBP16.91■□□□□ 0.3
ATL3-202ENST00000535789 STARD3Q14849 445 aa16.91■□□□□ 0.3
ATL3-202ENST00000535789 PLEKHG6Q3KR16 790 aa16.91■□□□□ 0.3
ATL3-202ENST00000535789 SLC25A52Q3SY17 297 aa16.91■□□□□ 0.3
ATL3-202ENST00000535789 SH3PXD2AQ5TCZ1 1133 aa16.91■□□□□ 0.3
ATL3-202ENST00000535789 MON1BQ7L1V2 547 aa16.91■□□□□ 0.3
ATL3-202ENST00000535789 CYP2U1Q7Z449 544 aa16.91■□□□□ 0.3
ATL3-202ENST00000535789 IRF2BP2Q7Z5L9 587 aa16.91■□□□□ 0.3
ATL3-202ENST00000535789 TMPRSS6Q8IU80 811 aa16.91■□□□□ 0.3
ATL3-202ENST00000535789 ALG14Q96F25 216 aa16.91■□□□□ 0.3
ATL3-202ENST00000535789 TKTL2Q9H0I9 626 aa16.91■□□□□ 0.3
ATL3-202ENST00000535789 PRDM16Q9HAZ2 1276 aa16.91■□□□□ 0.3
ATL3-202ENST00000535789 PRSS16Q9NQE7 514 aa16.91■□□□□ 0.3
ATL3-202ENST00000535789 VPS45Q9NRW7 570 aa16.91■□□□□ 0.3
ATL3-202ENST00000535789 A0A1B0GVM2 712 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 TYW5A2RUC4 315 aaKnown RBP16.9■□□□□ 0.3
ATL3-202ENST00000535789 TCAF2A6NFQ2 919 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 CNTN5O94779 1100 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 IGLV3-19P01714 112 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 SLC2A3P11169 496 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 PDGFRAP16234 1089 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 POLR2EP19388 210 aaKnown RBP16.9■□□□□ 0.3
ATL3-202ENST00000535789 TPMTP51580 245 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 SNX16P57768 344 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 DEUP1Q05D60 604 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 C15orf59Q2T9L4 293 aaPredicted RBP16.9■□□□□ 0.3
ATL3-202ENST00000535789 ALFQ53S48 1182 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 TRIM72Q6ZMU5 477 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 LPCAT2Q7L5N7 544 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 ARCQ7LC44 396 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 METTL3Q86U44 580 aaKnown RBP16.9■□□□□ 0.3
ATL3-202ENST00000535789 OR2T3Q8NH03 318 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 NETO1Q8TDF5 533 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 RNF34Q969K3 372 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 RPRD1AQ96P16 312 aaPredicted RBP16.9■□□□□ 0.3
ATL3-202ENST00000535789 RRN3Q9NYV6 651 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 TAS2R14Q9NYV8 317 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 ZNF212Q9UDV6 495 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 STAP1Q9ULZ2 295 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 NEU3Q9UQ49 428 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 ERVW-1Q9UQF0 538 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 ITIH6Q6UXX5 1313 aa16.9■□□□□ 0.3
ATL3-202ENST00000535789 C2CD4BA6NLJ0 364 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 LRRC53A6NM62 1247 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 TTC34A8MYJ7 566 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 PRR5-ARHGAP8B1AHC4 643 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 H0Y626 953 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 SLC30A4O14863 429 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 ZNF217O75362 1048 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 ENDOD1O94919 500 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 ARHGAP8P85298 464 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 PUM1Q14671 1186 aaKnown RBP eCLIP16.89■□□□□ 0.29
ATL3-202ENST00000535789 CCDC14Q49A88 953 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 AASDHQ4L235 1098 aaPredicted RBP16.89■□□□□ 0.29
ATL3-202ENST00000535789 BRMS1LQ5PSV4 323 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 TTC39BQ5VTQ0 682 aaPredicted RBP16.89■□□□□ 0.29
ATL3-202ENST00000535789 FAM131BQ86XD5 332 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 DNAAF5Q86Y56 855 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 PHF13Q86YI8 300 aaPredicted RBP16.89■□□□□ 0.29
ATL3-202ENST00000535789 ZNF557Q8N988 423 aaPredicted RBP16.89■□□□□ 0.29
ATL3-202ENST00000535789 PIGKQ92643 395 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 AGPAT1Q99943 283 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 MAGEB5Q9BZ81 275 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 SIK2Q9H0K1 926 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 FSCN3Q9NQT6 498 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 ITM2CQ9NQX7 267 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 WSB2Q9NYS7 404 aaPredicted RBP16.89■□□□□ 0.29
ATL3-202ENST00000535789 KIAA1522Q9P206 1035 aaPredicted RBP16.89■□□□□ 0.29
ATL3-202ENST00000535789 PILRBQ9UKJ0 227 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 CDV3Q9UKY7 258 aaKnown RBP16.89■□□□□ 0.29
ATL3-202ENST00000535789 OR51B4Q9Y5P0 310 aa16.89■□□□□ 0.29
ATL3-202ENST00000535789 ANKRD36A6QL64 1941 aa16.88■□□□□ 0.29
ATL3-202ENST00000535789 IGLV3-10A0A075B6K4 115 aa16.88■□□□□ 0.29
ATL3-202ENST00000535789 MAP3K13O43283 966 aa16.88■□□□□ 0.29
ATL3-202ENST00000535789 SYNCRIPO60506 623 aaKnown RBP16.88■□□□□ 0.29
ATL3-202ENST00000535789 SIN3BO75182 1162 aa16.88■□□□□ 0.29
ATL3-202ENST00000535789 ATP5BP06576 529 aaKnown RBP16.88■□□□□ 0.29
ATL3-202ENST00000535789 VAV1P15498 845 aa16.88■□□□□ 0.29
ATL3-202ENST00000535789 RDXP35241 583 aaKnown RBP16.88■□□□□ 0.29
ATL3-202ENST00000535789 PBX1P40424 430 aa16.88■□□□□ 0.29
ATL3-202ENST00000535789 RPS14P62263 151 aaKnown RBP16.88■□□□□ 0.29
ATL3-202ENST00000535789 ATP11AP98196 1134 aa16.88■□□□□ 0.29
ATL3-202ENST00000535789 ZNF33AQ06730 810 aa16.88■□□□□ 0.29
ATL3-202ENST00000535789 BYSLQ13895 437 aaKnown RBP16.88■□□□□ 0.29
ATL3-202ENST00000535789 NR1I3Q14994 352 aa16.88■□□□□ 0.29
ATL3-202ENST00000535789 HNRNPA1L2Q32P51 320 aaKnown RBP16.88■□□□□ 0.29
ATL3-202ENST00000535789 SPDYCQ5MJ68 293 aa16.88■□□□□ 0.29
ATL3-202ENST00000535789 RABGAP1LQ5R372 815 aa16.88■□□□□ 0.29
ATL3-202ENST00000535789 LYSMD4Q5XG99 296 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms