RNA–Protein interactions for RNA: ENST00000535477.5

CLPB-205, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-205ENST00000535477 EXOC3L1Q86VI1 746 aa19.29■□□□□ 0.68
CLPB-205ENST00000535477 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.29■□□□□ 0.68
CLPB-205ENST00000535477 BADQ92934 168 aa19.29■□□□□ 0.68
CLPB-205ENST00000535477 ZBED2Q9BTP6 218 aa19.29■□□□□ 0.68
CLPB-205ENST00000535477 FRMD8Q9BZ67 464 aaPredicted RBP19.29■□□□□ 0.68
CLPB-205ENST00000535477 SLC39A8Q9C0K1 460 aa19.29■□□□□ 0.68
CLPB-205ENST00000535477 BRD8Q9H0E9 1235 aa19.29■□□□□ 0.68
CLPB-205ENST00000535477 PIH1D1Q9NWS0 290 aaKnown RBP19.29■□□□□ 0.68
CLPB-205ENST00000535477 GREB1Q4ZG55 1949 aa19.28■□□□□ 0.68
CLPB-205ENST00000535477 ZBTB24O43167 697 aaPredicted RBP19.28■□□□□ 0.68
CLPB-205ENST00000535477 SHOX2O60902 331 aaPredicted RBP19.28■□□□□ 0.68
CLPB-205ENST00000535477 FGBP02675 491 aa19.28■□□□□ 0.68
CLPB-205ENST00000535477 HTR7P34969 479 aa19.28■□□□□ 0.68
CLPB-205ENST00000535477 TPGS2Q68CL5 300 aa19.28■□□□□ 0.68
CLPB-205ENST00000535477 TFAP2DQ7Z6R9 452 aa19.28■□□□□ 0.68
CLPB-205ENST00000535477 ARHGAP12Q8IWW6 846 aa19.28■□□□□ 0.68
CLPB-205ENST00000535477 USP33Q8TEY7 942 aa19.28■□□□□ 0.68
CLPB-205ENST00000535477 BTN2A3PQ96KV6 586 aa19.28■□□□□ 0.68
CLPB-205ENST00000535477 RABEP2Q9H5N1 569 aa19.28■□□□□ 0.68
CLPB-205ENST00000535477 MRPL17Q9NRX2 175 aaKnown RBP19.28■□□□□ 0.68
CLPB-205ENST00000535477 PRKAG2Q9UGJ0 569 aa19.28■□□□□ 0.68
CLPB-205ENST00000535477 MAD1L1Q9Y6D9 718 aa19.28■□□□□ 0.68
CLPB-205ENST00000535477 JCHAINP01591 159 aa19.27■□□□□ 0.68
CLPB-205ENST00000535477 SPATA31D3P0C874 917 aa19.27■□□□□ 0.68
CLPB-205ENST00000535477 HMGA1P17096 107 aaKnown RBP19.27■□□□□ 0.68
CLPB-205ENST00000535477 KCNQ1P51787 676 aa19.27■□□□□ 0.68
CLPB-205ENST00000535477 SPARCL1Q14515 664 aa19.27■□□□□ 0.68
CLPB-205ENST00000535477 LRRC31Q6UY01 552 aa19.27■□□□□ 0.68
CLPB-205ENST00000535477 SPATA31D4Q6ZUB0 917 aa19.27■□□□□ 0.68
CLPB-205ENST00000535477 MPP5Q8N3R9 675 aa19.27■□□□□ 0.68
CLPB-205ENST00000535477 ATPAF2Q8N5M1 289 aa19.27■□□□□ 0.68
CLPB-205ENST00000535477 YIPF1Q9Y548 306 aa19.27■□□□□ 0.68
CLPB-205ENST00000535477 PCDHB12Q9Y5F1 795 aa19.27■□□□□ 0.68
CLPB-205ENST00000535477 NUP205Q92621 2012 aa19.27■□□□□ 0.68
CLPB-205ENST00000535477 ERICH4A6NGS2 130 aa19.27■□□□□ 0.67
CLPB-205ENST00000535477 CREB1P16220 341 aa19.27■□□□□ 0.67
CLPB-205ENST00000535477 ATP5DP30049 168 aa19.27■□□□□ 0.67
CLPB-205ENST00000535477 ELF1P32519 619 aa19.27■□□□□ 0.67
CLPB-205ENST00000535477 ATP5C1P36542 298 aaKnown RBP19.27■□□□□ 0.67
CLPB-205ENST00000535477 SARNPP82979 210 aaKnown RBP19.27■□□□□ 0.67
CLPB-205ENST00000535477 COG7P83436 770 aa19.27■□□□□ 0.67
CLPB-205ENST00000535477 PLD1Q13393 1074 aa19.27■□□□□ 0.67
CLPB-205ENST00000535477 RAB33AQ14088 237 aa19.27■□□□□ 0.67
CLPB-205ENST00000535477 TAOK1Q7L7X3 1001 aa19.27■□□□□ 0.67
CLPB-205ENST00000535477 LZTR1Q8N653 840 aa19.27■□□□□ 0.67
CLPB-205ENST00000535477 RTL3Q8N8U3 475 aaKnown RBP19.27■□□□□ 0.67
CLPB-205ENST00000535477 XPO6Q96QU8 1125 aaKnown RBP19.27■□□□□ 0.67
CLPB-205ENST00000535477 TMEM51Q9NW97 253 aa19.27■□□□□ 0.67
CLPB-205ENST00000535477 IGSF9Q9P2J2 1179 aa19.27■□□□□ 0.67
CLPB-205ENST00000535477 ZC3H7BQ9UGR2 993 aaKnown RBP19.27■□□□□ 0.67
CLPB-205ENST00000535477 RSPH14Q9UHP6 348 aa19.27■□□□□ 0.67
CLPB-205ENST00000535477 GOLGA6L7A0A1B0GV03 622 aa19.26■□□□□ 0.67
CLPB-205ENST00000535477 ZNF840PA6NDX5 716 aa19.26■□□□□ 0.67
CLPB-205ENST00000535477 MTSS1O43312 755 aa19.26■□□□□ 0.67
CLPB-205ENST00000535477 FGF18O76093 207 aa19.26■□□□□ 0.67
CLPB-205ENST00000535477 CNTN5O94779 1100 aa19.26■□□□□ 0.67
CLPB-205ENST00000535477 CSPG5O95196 566 aa19.26■□□□□ 0.67
CLPB-205ENST00000535477 GJB5O95377 273 aa19.26■□□□□ 0.67
CLPB-205ENST00000535477 CSH1P0DML2 217 aa19.26■□□□□ 0.67
CLPB-205ENST00000535477 CSH2P0DML3 217 aa19.26■□□□□ 0.67
CLPB-205ENST00000535477 NRG1Q02297 640 aaPredicted RBP19.26■□□□□ 0.67
CLPB-205ENST00000535477 TWF1Q12792 350 aa19.26■□□□□ 0.67
CLPB-205ENST00000535477 TEX44Q53QW1 395 aa19.26■□□□□ 0.67
CLPB-205ENST00000535477 TRIM56Q9BRZ2 755 aaKnown RBP19.26■□□□□ 0.67
CLPB-205ENST00000535477 ZYG11BQ9C0D3 744 aa19.26■□□□□ 0.67
CLPB-205ENST00000535477 CXXC1Q9P0U4 656 aaPredicted RBP19.26■□□□□ 0.67
CLPB-205ENST00000535477 LGALS13Q9UHV8 139 aa19.26■□□□□ 0.67
CLPB-205ENST00000535477 DNMT3LQ9UJW3 386 aa19.26■□□□□ 0.67
CLPB-205ENST00000535477 LAMA2P24043 3122 aaKnown RBP19.26■□□□□ 0.67
CLPB-205ENST00000535477 TCRBV9S1A1TA0A576 114 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 CPP00450 1065 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 IGLV3-27P01718 113 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 CD68P34810 354 aaPredicted RBP19.25■□□□□ 0.67
CLPB-205ENST00000535477 MMP13P45452 471 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 GEMIN4P57678 1058 aaKnown RBP19.25■□□□□ 0.67
CLPB-205ENST00000535477 OLIG2Q13516 323 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 ALFQ53S48 1182 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 FBXL22Q6P050 247 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 FIBCD1Q8N539 461 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 PDZD8Q8NEN9 1154 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 IGSF8Q969P0 613 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 ACSS3Q9H6R3 686 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 XAB2Q9HCS7 855 aaKnown RBP19.25■□□□□ 0.67
CLPB-205ENST00000535477 TTLL3Q9Y4R7 772 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 TEX28O15482 410 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 NFKB1P19838 968 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 CCNCP24863 283 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 PPM1AP35813 382 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 MAGEA3P43357 314 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 SESN2P58004 480 aaPredicted RBP19.25■□□□□ 0.67
CLPB-205ENST00000535477 CRADDP78560 199 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 HECTD3Q5T447 861 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 SRRM1Q8IYB3 904 aaKnown RBP19.25■□□□□ 0.67
CLPB-205ENST00000535477 ZNF683Q8IZ20 524 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 SIGLEC10Q96LC7 697 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 CEP295NLQ96MC4 621 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 RPRD1AQ96P16 312 aaPredicted RBP19.25■□□□□ 0.67
CLPB-205ENST00000535477 EURLQ9NYK6 297 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 TRPM5Q9NZQ8 1165 aa19.25■□□□□ 0.67
CLPB-205ENST00000535477 HSFX1Q9UBD0 423 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms