RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 GRNP28799 593 aaKnown RBP11.14□□□□□ -0.63
VAMP1-204ENST00000535180 UQCRFS1P47985 274 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 PSEN1P49768 467 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 TNNC1P63316 161 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 SPIDRQ14159 915 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 ARID5BQ14865 1188 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 WDR72Q3MJ13 1102 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 SETMARQ53H47 684 aaPredicted RBP11.14□□□□□ -0.63
VAMP1-204ENST00000535180 C9orf64Q5T6V5 341 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 DIEXFQ68CQ4 756 aaKnown RBP11.14□□□□□ -0.63
VAMP1-204ENST00000535180 RSRC2Q7L4I2 434 aaKnown RBP11.14□□□□□ -0.63
VAMP1-204ENST00000535180 DSG4Q86SJ6 1040 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 TRIM69Q86WT6 500 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 DTX1Q86Y01 620 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 NECAB1Q8N987 351 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 C9orf43Q8TAL5 461 aaPredicted RBP11.14□□□□□ -0.63
VAMP1-204ENST00000535180 IFT43Q96FT9 208 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 STRA6Q9BX79 667 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 EXOC7Q9UPT5 735 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 CA5BQ9Y2D0 317 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 PCDHB11Q9Y5F2 797 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 SVILO95425 2214 aa11.14□□□□□ -0.63
VAMP1-204ENST00000535180 A0A087X0B3 334 aa11.13□□□□□ -0.63
VAMP1-204ENST00000535180 TARSL2A2RTX5 802 aaKnown RBP11.13□□□□□ -0.63
VAMP1-204ENST00000535180 TMX2-CTNND1H3BSU7 103 aa11.13□□□□□ -0.63
VAMP1-204ENST00000535180 CASC3O15234 703 aaKnown RBP11.13□□□□□ -0.63
VAMP1-204ENST00000535180 JAK2O60674 1132 aa11.13□□□□□ -0.63
VAMP1-204ENST00000535180 REC8O95072 547 aa11.13□□□□□ -0.63
VAMP1-204ENST00000535180 ADH1BP00325 375 aa11.13□□□□□ -0.63
VAMP1-204ENST00000535180 CST3P01034 146 aaPredicted RBP11.13□□□□□ -0.63
VAMP1-204ENST00000535180 KRT7P08729 469 aa11.13□□□□□ -0.63
VAMP1-204ENST00000535180 PSMD8P48556 350 aa11.13□□□□□ -0.63
VAMP1-204ENST00000535180 TOB1P50616 345 aaPredicted RBP11.13□□□□□ -0.63
VAMP1-204ENST00000535180 MAP3K7CLP57077 242 aa11.13□□□□□ -0.63
VAMP1-204ENST00000535180 ST8SIA6P61647 398 aa11.13□□□□□ -0.63
VAMP1-204ENST00000535180 KCNA1Q09470 495 aa11.13□□□□□ -0.63
VAMP1-204ENST00000535180 DHX8Q14562 1220 aaKnown RBP11.13□□□□□ -0.63
VAMP1-204ENST00000535180 POM121L1PQ3SYA9 428 aa11.13□□□□□ -0.63
VAMP1-204ENST00000535180 PERM1Q5SV97 790 aa11.13□□□□□ -0.63
VAMP1-204ENST00000535180 CAPRIN2Q6IMN6 1127 aaKnown RBP11.13□□□□□ -0.63
VAMP1-204ENST00000535180 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.13□□□□□ -0.63
VAMP1-204ENST00000535180 GPRIN1Q7Z2K8 1008 aa11.13□□□□□ -0.63
VAMP1-204ENST00000535180 MAMDC2Q7Z304 686 aaPredicted RBP11.13□□□□□ -0.63
VAMP1-204ENST00000535180 TMEM145Q8NBT3 493 aa11.13□□□□□ -0.63
VAMP1-204ENST00000535180 TNIP3Q96KP6 325 aa11.13□□□□□ -0.63
VAMP1-204ENST00000535180 CDK5RAP1Q96SZ6 601 aaKnown RBP11.13□□□□□ -0.63
VAMP1-204ENST00000535180 FAM129BQ96TA1 746 aa11.13□□□□□ -0.63
VAMP1-204ENST00000535180 RASAL2Q9UJF2 1139 aa11.13□□□□□ -0.63
VAMP1-204ENST00000535180 NAGPAQ9UK23 515 aa11.13□□□□□ -0.63
VAMP1-204ENST00000535180 SHANK1Q9Y566 2161 aa11.13□□□□□ -0.63
VAMP1-204ENST00000535180 UBE4BO95155 1302 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 NTN3O00634 580 aaPredicted RBP11.12□□□□□ -0.63
VAMP1-204ENST00000535180 SEMA7AO75326 666 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 RALAP11233 206 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 HGFP14210 728 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 DRD3P35462 400 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 DDIT3P35638 169 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 ZNF445P59923 1031 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 HNRNPKP61978 463 aaKnown RBP eCLIP11.12□□□□□ -0.63
VAMP1-204ENST00000535180 EFEMP1Q12805 493 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 SURF1Q15526 300 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 C1QL3Q5VWW1 255 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 TRAPPC11Q7Z392 1133 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 SCD5Q86SK9 330 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 ZFAND4Q86XD8 727 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 KDM1BQ8NB78 822 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 NOC3LQ8WTT2 800 aaKnown RBP11.12□□□□□ -0.63
VAMP1-204ENST00000535180 TTC17Q96AE7 1141 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 FAM131CQ96AQ9 280 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 TMA16Q96EY4 203 aaKnown RBP11.12□□□□□ -0.63
VAMP1-204ENST00000535180 STRADBQ9C0K7 418 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 EPB41L5Q9HCM4 733 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 CLIC5Q9NZA1 410 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 SALL4Q9UJQ4 1053 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 PCDHA5Q9Y5H7 936 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 CSNK1G3Q9Y6M4 447 aa11.12□□□□□ -0.63
VAMP1-204ENST00000535180 PRRC2CQ9Y520 2896 aaKnown RBP11.11□□□□□ -0.63
VAMP1-204ENST00000535180 PRAMEF33A0A0G2JMD5 474 aa11.11□□□□□ -0.63
VAMP1-204ENST00000535180 WIPF3A6NGB9 483 aa11.11□□□□□ -0.63
VAMP1-204ENST00000535180 HHLA1C9JL84 531 aa11.11□□□□□ -0.63
VAMP1-204ENST00000535180 SLC7A4O43246 635 aa11.11□□□□□ -0.63
VAMP1-204ENST00000535180 EPB41L2O43491 1005 aaKnown RBP11.11□□□□□ -0.63
VAMP1-204ENST00000535180 PLRG1O43660 514 aaKnown RBP11.11□□□□□ -0.63
VAMP1-204ENST00000535180 PRAMEF10O60809 474 aa11.11□□□□□ -0.63
VAMP1-204ENST00000535180 VPS4BO75351 444 aa11.11□□□□□ -0.63
VAMP1-204ENST00000535180 DDAH2O95865 285 aa11.11□□□□□ -0.63
VAMP1-204ENST00000535180 PRKCGP05129 697 aa11.11□□□□□ -0.63
VAMP1-204ENST00000535180 JMJD7P0C870 316 aa11.11□□□□□ -0.63
VAMP1-204ENST00000535180 GNLYP22749 145 aa11.11□□□□□ -0.63
VAMP1-204ENST00000535180 CD70P32970 193 aa11.11□□□□□ -0.63
VAMP1-204ENST00000535180 MLLT10P55197 1068 aa11.11□□□□□ -0.63
VAMP1-204ENST00000535180 KLRB1Q12918 225 aa11.11□□□□□ -0.63
VAMP1-204ENST00000535180 DRAP1Q14919 205 aaPredicted RBP11.11□□□□□ -0.63
VAMP1-204ENST00000535180 NR0B2Q15466 257 aa11.11□□□□□ -0.63
VAMP1-204ENST00000535180 ME3Q16798 604 aa11.11□□□□□ -0.63
VAMP1-204ENST00000535180 B3GNT8Q7Z7M8 397 aa11.11□□□□□ -0.63
VAMP1-204ENST00000535180 WDR49Q8IV35 697 aa11.11□□□□□ -0.63
VAMP1-204ENST00000535180 GPD1LQ8N335 351 aa11.11□□□□□ -0.63
VAMP1-204ENST00000535180 ZNF548Q8NEK5 533 aaPredicted RBP11.11□□□□□ -0.63
VAMP1-204ENST00000535180 SLC2A14Q8TDB8 520 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms