RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 HSPA12BQ96MM6 686 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 ERGIC2Q96RQ1 377 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 CDC6Q99741 560 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 EDEM3Q9BZQ6 932 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 PDCL3Q9H2J4 239 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 POLR3BQ9NW08 1133 aaPredicted RBP10.73□□□□□ -0.69
CSDE1-217ENST00000534699 DMTF1Q9Y222 760 aa10.73□□□□□ -0.69
CSDE1-217ENST00000534699 IGLV3-10A0A075B6K4 115 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.72□□□□□ -0.69
CSDE1-217ENST00000534699 EIF3CLB5ME19 914 aaKnown RBP10.72□□□□□ -0.69
CSDE1-217ENST00000534699 GJB3O75712 270 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 GOT1P17174 413 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 DESP17661 470 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 USP8P40818 1118 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 STAT1P42224 750 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 GEMIN4P57678 1058 aaKnown RBP10.72□□□□□ -0.69
CSDE1-217ENST00000534699 OVGP1Q12889 678 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 ZNF177Q13360 481 aaPredicted RBP10.72□□□□□ -0.69
CSDE1-217ENST00000534699 SYPL2Q5VXT5 272 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 KIAA0895LQ68EN5 471 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 FAM183BPQ6ZVS7 135 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 OR2T34Q8NGX1 318 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 IQCDQ96DY2 449 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 EIF3CQ99613 913 aaKnown RBP10.72□□□□□ -0.69
CSDE1-217ENST00000534699 CRACR2AQ9BSW2 395 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 GANQ9H2C0 597 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 DDIT4Q9NX09 232 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 NEUROG3Q9Y4Z2 214 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 F8VZ95 297 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 BCAT2O15382 392 aaPredicted RBP10.72□□□□□ -0.69
CSDE1-217ENST00000534699 GDF9O60383 454 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 CYP1A1P04798 512 aaPredicted RBP10.72□□□□□ -0.69
CSDE1-217ENST00000534699 WASP42768 502 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 CDR2Q01850 454 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 MYL5Q02045 173 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 ELAVL3Q14576 367 aaKnown RBP10.72□□□□□ -0.69
CSDE1-217ENST00000534699 ZC3H12AQ5D1E8 599 aaKnown RBP10.72□□□□□ -0.69
CSDE1-217ENST00000534699 CCDC183Q5T5S1 534 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 N4BP2L1Q5TBK1 243 aaPredicted RBP10.72□□□□□ -0.69
CSDE1-217ENST00000534699 STRADAQ7RTN6 431 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 IQCHQ86VS3 1027 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 CARNMT1Q8N4J0 409 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 RLN3Q8WXF3 142 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 MYO19Q96H55 970 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 SPAG5Q96R06 1193 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 CEP44Q9C0F1 390 aa10.72□□□□□ -0.69
CSDE1-217ENST00000534699 FARP1Q9Y4F1 1045 aaPredicted RBP10.72□□□□□ -0.69
CSDE1-217ENST00000534699 PTPRZ1P23471 2315 aaPredicted RBP10.72□□□□□ -0.69
CSDE1-217ENST00000534699 SMTNL1A8MU46 457 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 C1QTNF3-AMACRE9PGA6 284 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 SEMA4FO95754 770 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 ITPKAP23677 461 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 CD70P32970 193 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 SOX5P35711 763 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 PTGER3P43115 390 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 PTPN9P43378 593 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 JAM2P57087 298 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 ARL13BQ3SXY8 428 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 DCAF12L1Q5VU92 463 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 LRSAM1Q6UWE0 723 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 CCAR2Q8N163 923 aaKnown RBP10.71□□□□□ -0.69
CSDE1-217ENST00000534699 C1orf216Q8TAB5 229 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 P2RY11Q96G91 374 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 VCPIP1Q96JH7 1222 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 MKRN2Q9H000 416 aaKnown RBP10.71□□□□□ -0.69
CSDE1-217ENST00000534699 OSBPL2Q9H1P3 480 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 CLEC4EQ9ULY5 219 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 INVSQ9Y283 1065 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 RAD54BQ9Y620 910 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 DOCK4Q8N1I0 1966 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 RIF1Q5UIP0 2472 aaKnown RBP10.71□□□□□ -0.69
CSDE1-217ENST00000534699 LGALS16A8MUM7 142 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 FLRT2O43155 660 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 CALB1P05937 261 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 AFF3P51826 1226 aaKnown RBP10.71□□□□□ -0.69
CSDE1-217ENST00000534699 ZNF135P52742 658 aaPredicted RBP10.71□□□□□ -0.69
CSDE1-217ENST00000534699 PTPN20Q4JDL3 420 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 C6orf118Q5T5N4 469 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 XYLT1Q86Y38 959 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 CASKIN2Q8WXE0 1202 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 OR8D1Q8WZ84 308 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 RNF34Q969K3 372 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 C2orf49Q9BVC5 232 aaPredicted RBP10.71□□□□□ -0.69
CSDE1-217ENST00000534699 WDCPQ9H6R7 721 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 ERVMER34-1Q9H9K5 563 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 TMEM59LQ9UK28 342 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 HS3ST2Q9Y278 367 aa10.71□□□□□ -0.69
CSDE1-217ENST00000534699 ILVBLA1L0T0 632 aa10.71□□□□□ -0.7
CSDE1-217ENST00000534699 PCDHGA12O60330 932 aa10.71□□□□□ -0.7
CSDE1-217ENST00000534699 NOVA1P51513 510 aaKnown RBP10.71□□□□□ -0.7
CSDE1-217ENST00000534699 NOMO3P69849 1222 aa10.71□□□□□ -0.7
CSDE1-217ENST00000534699 AUHQ13825 339 aaKnown RBP10.71□□□□□ -0.7
CSDE1-217ENST00000534699 C9orf64Q5T6V5 341 aa10.71□□□□□ -0.7
CSDE1-217ENST00000534699 RAP1GAP2Q684P5 730 aa10.71□□□□□ -0.7
CSDE1-217ENST00000534699 RFWD3Q6PCD5 774 aa10.71□□□□□ -0.7
CSDE1-217ENST00000534699 SLC47A2Q86VL8 602 aa10.71□□□□□ -0.7
CSDE1-217ENST00000534699 PHF13Q86YI8 300 aaPredicted RBP10.71□□□□□ -0.7
CSDE1-217ENST00000534699 RGL4Q8IZJ4 473 aa10.71□□□□□ -0.7
CSDE1-217ENST00000534699 DCAF4L2Q8NA75 395 aa10.71□□□□□ -0.7
CSDE1-217ENST00000534699 TMIEQ8NEW7 156 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms