RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	C11orf74	Q86VG3	221 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	CYGB	Q8WWM9	190 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	GPR20	Q99678	358 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532		V9GYQ6	96 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	SIGLEC16	A6NMB1	481 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	TISP43	B9A030	160 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	APOC4-APOC2	K7ER74	178 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	KATNA1	O75449	491 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	APOC2	P02655	101 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	DNTT	P04053	509 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	SLC2A4	P14672	509 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	CYLC2	Q14093	348 aa	Predicted RBP	16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	MFSD7	Q6UXD7	560 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	CPA6	Q8N4T0	437 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	ZNF473	Q8WTR7	871 aa	Known RBP	16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	SH3BP4	Q9P0V3	963 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	KIF20B	Q96Q89	1820 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	TLR5	O60602	858 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	KRT8	P05787	483 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	DGKA	P23743	735 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	MGAT1	P26572	445 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	NUDT2	P50583	147 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	DNAJC3	Q13217	504 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	NFYC	Q13952	458 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	TARBP2	Q15633	366 aa	Known RBP	16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	CBWD6	Q4V339	395 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	CENPL	Q8N0S6	344 aa	Predicted RBP	16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	TBC1D14	Q9P2M4	693 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	KANSL1L	A0AUZ9	987 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	QSOX1	O00391	747 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	C21orf59	P57076	290 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	VPS50	Q96JG6	964 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	QRFPR	Q96P65	431 aa		16.04	■□□□□ 0.16
NCAPD3-213	ENST00000534532	INHA	P05111	366 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	PARP6	Q2NL67	630 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	PLEKHM3	Q6ZWE6	761 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	MARK2	Q7KZI7	788 aa	Known RBP	16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	COLGALT2	Q8IYK4	626 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	OR8D1	Q8WZ84	308 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	INPP5D	Q92835	1189 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	BTBD7	Q9P203	1132 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	KPNA5	O15131	536 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	PSMA4	P25789	261 aa	Known RBP	16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	C16orf87	Q6PH81	154 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	CDK20	Q8IZL9	346 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	TDRD5	Q8NAT2	981 aa	Known RBP	16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	OR56A4	Q8NGH8	313 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	BBS4	Q96RK4	519 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	SCAMP3	O14828	347 aa	Known RBP	16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	CHRNB3	Q05901	458 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	SULT2A1	Q06520	285 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	PPP3CA	Q08209	521 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	ZBTB17	Q13105	803 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	CRY1	Q16526	586 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	WLS	Q5T9L3	541 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	MON1A	Q86VX9	555 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	MTMR14	Q8NCE2	650 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	DPY30	Q9C005	99 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	CDC42EP4	Q9H3Q1	356 aa	Known RBP	16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	NEURL4	Q96JN8	1562 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	WDR27	A2RRH5	827 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	APOD	P05090	189 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	SKIV2L2	P42285	1042 aa	Known RBP	16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	MAGEA9	P43362	315 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	ERF	P50548	548 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	RRP1B	Q14684	758 aa	Known RBP	16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	PPL	O60437	1756 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	CAMTA1	Q9Y6Y1	1673 aa		16.03	■□□□□ 0.16
NCAPD3-213	ENST00000534532	ANKRD65	E5RJM6	399 aa		16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	ARF4	P18085	180 aa	Predicted RBP	16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	RUNX1T1	Q06455	604 aa		16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	DDR2	Q16832	855 aa		16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	SCARA3	Q6AZY7	606 aa		16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	MAGED4	Q96JG8	741 aa		16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	CPNE1	Q99829	537 aa		16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	BRCC3	P46736	316 aa		16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	GPR158	Q5T848	1215 aa		16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	OLFM3	Q96PB7	478 aa		16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	DUSP9	Q99956	384 aa	Known RBP	16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	KRT84	Q9NSB2	600 aa		16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	CATSPERZ	Q9NTU4	200 aa		16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	PADI3	Q9ULW8	664 aa		16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	GPSM3	Q9Y4H4	160 aa		16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	B4GALT5	O43286	388 aa		16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	CXCR2	P25025	360 aa		16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	ELK3	P41970	407 aa		16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	ZNF143	P52747	638 aa	Predicted RBP	16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	HNRNPH2	P55795	449 aa	Known RBP	16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	MILR1	Q7Z6M3	343 aa		16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	MCCC1	Q96RQ3	725 aa	Predicted RBP	16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	PRRG3	Q9BZD7	231 aa		16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	SNX8	Q9Y5X2	465 aa		16.02	■□□□□ 0.16
NCAPD3-213	ENST00000534532	COL3A1	P02461	1466 aa	Predicted RBP	16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	DNALI1	O14645	258 aa	Predicted RBP	16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	KEL	P23276	732 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	FMO4	P31512	558 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	PRKAA2	P54646	552 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	GNA13	Q14344	377 aa		16.02	■□□□□ 0.15
NCAPD3-213	ENST00000534532	ZNF544	Q6NX49	715 aa		16.02	■□□□□ 0.15

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms