RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 TLR8Q9NR97 1041 aaKnown RBP6.75□□□□□ -1.33
CD44-237ENST00000534082 RBAKQ9NYW8 714 aaPredicted RBP6.75□□□□□ -1.33
CD44-237ENST00000534082 IL37Q9NZH6 218 aa6.75□□□□□ -1.33
CD44-237ENST00000534082 ODF2LQ9ULJ1 636 aa6.75□□□□□ -1.33
CD44-237ENST00000534082 FZD4Q9ULV1 537 aa6.75□□□□□ -1.33
CD44-237ENST00000534082 TPX2Q9ULW0 747 aaKnown RBP6.75□□□□□ -1.33
CD44-237ENST00000534082 PLA2G4CQ9UP65 541 aa6.75□□□□□ -1.33
CD44-237ENST00000534082 R3HCC1Q9Y3T6 440 aaKnown RBP6.75□□□□□ -1.33
CD44-237ENST00000534082 PCDHGA7Q9Y5G6 932 aa6.75□□□□□ -1.33
CD44-237ENST00000534082 CSMD2Q7Z408 3487 aa6.75□□□□□ -1.33
CD44-237ENST00000534082 ATP8B3O60423 1300 aa6.75□□□□□ -1.33
CD44-237ENST00000534082 VPS37CA5D8V6 355 aaPredicted RBP6.74□□□□□ -1.33
CD44-237ENST00000534082 LATO43561 262 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 PFKFB2O60825 505 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 TCEA3O75764 348 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 KLKB1P03952 638 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 PLA2G4BP0C869 781 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 RNF224P0DH78 156 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 VSIG8P0DPA2 414 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 HLA-FP30511 346 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 CORO1AP31146 461 aaKnown RBP6.74□□□□□ -1.33
CD44-237ENST00000534082 ABCD1P33897 745 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 CHKAP35790 457 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 GNL1P36915 607 aaPredicted RBP6.74□□□□□ -1.33
CD44-237ENST00000534082 TRAPPC10P48553 1259 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 HARS2P49590 506 aaKnown RBP6.74□□□□□ -1.33
CD44-237ENST00000534082 PDX1P52945 283 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 OXCT1P55809 520 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 GTF2BQ00403 316 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 EHHADHQ08426 723 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 SFSWAPQ12872 951 aaKnown RBP6.74□□□□□ -1.33
CD44-237ENST00000534082 OVGP1Q12889 678 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 CST6Q15828 149 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 ARSHQ5FYA8 562 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 BORAQ6PGQ7 559 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 CRTC1Q6UUV9 634 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 C4orf32Q8N8J7 132 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 ZSWIM2Q8NEG5 633 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 OR6B3Q8NGW1 331 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 WFIKKN2Q8TEU8 576 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 SAAL1Q96ER3 474 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 FIZ1Q96SL8 496 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 OMDQ99983 421 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 SLC2A11Q9BYW1 496 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 MTG2Q9H4K7 406 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 CAAP1Q9H8G2 361 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 PARVGQ9HBI0 331 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 COMMD8Q9NX08 183 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 OSER1Q9NX31 292 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 NLGN3Q9NZ94 848 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 SEPT10Q9P0V9 454 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 TUBD1Q9UJT1 453 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 NUDT5Q9UKK9 219 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 ACSL6Q9UKU0 697 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 ZNF510Q9Y2H8 683 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 ZFC3H1O60293 1989 aaKnown RBP6.74□□□□□ -1.33
CD44-237ENST00000534082 LRRK1Q38SD2 2015 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 UBE4BO95155 1302 aa6.74□□□□□ -1.33
CD44-237ENST00000534082 MTORP42345 2549 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.73□□□□□ -1.33
CD44-237ENST00000534082 CPED1A4D0V7 1026 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 CDC14CA4D256 554 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 ESPNB1AK53 854 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 K7ESM1 405 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 PLD2O14939 933 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 MTSS1O43312 755 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 RNASEH1O60930 286 aaKnown RBP6.73□□□□□ -1.33
CD44-237ENST00000534082 LILRA1O75019 489 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 SIN3BO75182 1162 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 TACC1O75410 805 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 PIAS2O75928 621 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 COL8A1P27658 744 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 GRNP28799 593 aaKnown RBP6.73□□□□□ -1.33
CD44-237ENST00000534082 DDIT3P35638 169 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 PTGIRP43119 386 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 PLA2G4AP47712 749 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 UQCRFS1P47985 274 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 ZNF131P52739 623 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 GUCY1B3Q02153 619 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 PDE4CQ08493 712 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 ZNF177Q13360 481 aaPredicted RBP6.73□□□□□ -1.33
CD44-237ENST00000534082 GNL2Q13823 731 aaKnown RBP6.73□□□□□ -1.33
CD44-237ENST00000534082 POSTNQ15063 836 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 CDKN3Q16667 212 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 C10orf120Q5SQS8 335 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 HYIQ5T013 277 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 FHL5Q5TD97 284 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 GUSBP11Q6P575 273 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 KLHDC10Q6PID8 442 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 CHST9Q7L1S5 443 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 EFL1Q7Z2Z2 1120 aaKnown RBP6.73□□□□□ -1.33
CD44-237ENST00000534082 ADIPOR2Q86V24 386 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 GPBP1Q86WP2 473 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 ZC3H3Q8IXZ2 948 aaKnown RBP6.73□□□□□ -1.33
CD44-237ENST00000534082 OR14C36Q8NHC7 312 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 DDI1Q8WTU0 396 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 SMARCD1Q96GM5 515 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 ANKRD36BP1Q96IX9 119 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 PLIN2Q99541 437 aa6.73□□□□□ -1.33
CD44-237ENST00000534082 MED10Q9BTT4 135 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms