RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CXCR3P49682 368 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 SULT1E1P49888 294 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 CDK17Q00537 523 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 MEA1Q16626 185 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 PLEKHG6Q3KR16 790 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 POM121L1PQ3SYA9 428 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 PRAMEF14Q5SWL7 426 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 FAM102AQ5T9C2 384 aaPredicted RBP9.95□□□□□ -0.82
SSBP3-215ENST00000533946 FAM72AQ5TYM5 149 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 PEAR1Q5VY43 1037 aaPredicted RBP9.95□□□□□ -0.82
SSBP3-215ENST00000533946 FAM72DQ6L9T8 149 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 PSAPL1Q6NUJ1 521 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 CAVIN1Q6NZI2 390 aaKnown RBP9.95□□□□□ -0.82
SSBP3-215ENST00000533946 BEND5Q7L4P6 421 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 SLC26A9Q7LBE3 791 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 BNIPLQ7Z465 357 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 TRMT11Q7Z4G4 463 aaKnown RBP9.95□□□□□ -0.82
SSBP3-215ENST00000533946 FAM72BQ86X60 149 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 SYT12Q8IV01 421 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 FAM114A1Q8IWE2 563 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 STK40Q8N2I9 435 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 ZCCHC9Q8N567 271 aaKnown RBP9.95□□□□□ -0.82
SSBP3-215ENST00000533946 GPR161Q8N6U8 529 aaKnown RBP9.95□□□□□ -0.82
SSBP3-215ENST00000533946 DEFB124Q8NES8 71 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 OR2T3Q8NH03 318 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 CCDC26Q8TAB7 109 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 GOLGA1Q92805 767 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 NT5C3BQ969T7 300 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 CNTNAP3BQ96NU0 1288 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 PSMB7Q99436 277 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 FUCA2Q9BTY2 467 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 GTPBP2Q9BX10 602 aaKnown RBP9.95□□□□□ -0.82
SSBP3-215ENST00000533946 CNTNAP3Q9BZ76 1288 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 METTL5Q9NRN9 209 aaKnown RBP9.95□□□□□ -0.82
SSBP3-215ENST00000533946 NDFIP2Q9NV92 336 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 SARDHQ9UL12 918 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 OR51B4Q9Y5P0 310 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 IGF2RP11717 2491 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 NBEAQ8NFP9 2946 aa9.95□□□□□ -0.82
SSBP3-215ENST00000533946 CABIN1Q9Y6J0 2220 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 TP53BP1Q12888 1972 aaPredicted RBP9.94□□□□□ -0.82
SSBP3-215ENST00000533946 A0A0D9SEW6 157 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 LGALS16A8MUM7 142 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 MID1O15344 667 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 SMAD6O43541 496 aaKnown RBP9.94□□□□□ -0.82
SSBP3-215ENST00000533946 SYNCRIPO60506 623 aaKnown RBP9.94□□□□□ -0.82
SSBP3-215ENST00000533946 HSF2BPO75031 334 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 KCNK5O95279 499 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 CYP1A1P04798 512 aaPredicted RBP9.94□□□□□ -0.82
SSBP3-215ENST00000533946 POLR2EP19388 210 aaKnown RBP9.94□□□□□ -0.82
SSBP3-215ENST00000533946 SOX5P35711 763 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 MATKP42679 507 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 LIMK1P53667 647 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 ATP11AP98196 1134 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 NNTQ13423 1086 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 STX1AQ16623 288 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 EFHC1Q5JVL4 640 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 CCDC183Q5T5S1 534 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 DCAF12L1Q5VU92 463 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 LINGO4Q6UY18 593 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 TFAP2DQ7Z6R9 452 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 ERICH1Q86X53 443 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 FAM131BQ86XD5 332 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 MMAAQ8IVH4 418 aaKnown RBP9.94□□□□□ -0.82
SSBP3-215ENST00000533946 AHI1Q8N157 1196 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 AADATQ8N5Z0 425 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 ZNF397Q8NF99 534 aaPredicted RBP9.94□□□□□ -0.82
SSBP3-215ENST00000533946 FRS2Q8WU20 508 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 PTPRN2Q92932 1015 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 VOPP1Q96AW1 172 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 C18orf8Q96DM3 657 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 BTN2A3PQ96KV6 586 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 SPACA7Q96KW9 195 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 GBP4Q96PP9 640 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 C11orf70Q9BRQ4 267 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 TKTL2Q9H0I9 626 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 MIR1-1HGQ9H1L0 117 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.94□□□□□ -0.82
SSBP3-215ENST00000533946 ZNF212Q9UDV6 495 aa9.94□□□□□ -0.82
SSBP3-215ENST00000533946 EIF2B4Q9UI10 523 aaKnown RBP9.94□□□□□ -0.82
SSBP3-215ENST00000533946 DSPP15924 2871 aaKnown RBP9.93□□□□□ -0.82
SSBP3-215ENST00000533946 SPAARA0A1B0GVQ0 90 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 H0Y626 953 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 APOEP02649 317 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 ADRB1P08588 477 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 UNGP13051 313 aaPredicted RBP9.93□□□□□ -0.82
SSBP3-215ENST00000533946 CD59P13987 128 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 NOS2P35228 1153 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 CSNK1EP49674 416 aaKnown RBP9.93□□□□□ -0.82
SSBP3-215ENST00000533946 CDR2Q01850 454 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 MYL5Q02045 173 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 OGDHQ02218 1023 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 UBXN1Q04323 297 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 CDH18Q13634 790 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 STARD3Q14849 445 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 IQCB1Q15051 598 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 EIF4HQ15056 248 aaKnown RBP9.93□□□□□ -0.82
SSBP3-215ENST00000533946 CDO1Q16878 200 aa9.93□□□□□ -0.82
SSBP3-215ENST00000533946 HNRNPA1L2Q32P51 320 aaKnown RBP9.93□□□□□ -0.82
SSBP3-215ENST00000533946 CCDC14Q49A88 953 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms