RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 DDIT4Q9NX09 232 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 XPO7Q9UIA9 1087 aaKnown RBP12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 DNAJC12Q9UKB3 198 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 INTS6Q9UL03 887 aaKnown RBP12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 ERVW-1Q9UQF0 538 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 PCDH15Q96QU1 1955 aa12.83□□□□□ -0.36
CAPRIN1-213ENST00000533562 EDDM13A0A1B0GTR0 161 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 SH3BP5O60239 455 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 SIN3BO75182 1162 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 KRT37O76014 449 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 PROS1P07225 676 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 ZNF883P0CG24 379 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 MATKP42679 507 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 CSNK1EP49674 416 aaKnown RBP12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 SULT2A1Q06520 285 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 ZNF423Q2M1K9 1284 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 HLA-BQ31612 363 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 VWA3BQ502W6 1294 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 OR6B2Q6IFH4 312 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 UNQ6494/PRO21346Q6UXR6 183 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 MMS22LQ6ZRQ5 1243 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 ZDHHC17Q8IUH5 632 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 PASD1Q8IV76 773 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 MRGPRX3Q96LB0 322 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 TUBGCP2Q9BSJ2 902 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 ADAM33Q9BZ11 813 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 PDCL3Q9H2J4 239 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 TMEM51Q9NW97 253 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 FBXL12Q9NXK8 326 aa12.82□□□□□ -0.36
CAPRIN1-213ENST00000533562 SPEGQ15772 3267 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 SYNJ2BP-COX16A0A087WUM0 186 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 GRAP2O75791 330 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 FSBPO95073 299 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 SPINK2P20155 84 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 CD27P26842 260 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 NOS2P35228 1153 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 CLCN1P35523 988 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 PITX1P78337 314 aaPredicted RBP12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 SLC6A3Q01959 620 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 NME3Q13232 169 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 SUZ12Q15022 739 aaKnown RBP12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 CST6Q15828 149 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 CT47A1Q5JQC4 288 aaPredicted RBP12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 C9orf64Q5T6V5 341 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 SLC47A2Q86VL8 602 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 NAXDQ8IW45 347 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 DHX40Q8IX18 779 aaKnown RBP12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 FAM71AQ8IYT1 594 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 APCDD1Q8J025 514 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 CCAR2Q8N163 923 aaKnown RBP12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 C1orf131Q8NDD1 294 aaKnown RBP12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 SETD7Q8WTS6 366 aaKnown RBP12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 BIRC7Q96CA5 298 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 CAMK1GQ96NX5 476 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 PRMT1Q99873 361 aaKnown RBP12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 OMDQ99983 421 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 PABPC3Q9H361 631 aaKnown RBP12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 MTG2Q9H4K7 406 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 SIX2Q9NPC8 291 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 RRN3Q9NYV6 651 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 COX16Q9P0S2 106 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 SLCO3A1Q9UIG8 710 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 NEUROG3Q9Y4Z2 214 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 DMXL2Q8TDJ6 3036 aa12.81□□□□□ -0.36
CAPRIN1-213ENST00000533562 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 A0A1B0GVM2 712 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 A0A1B0GVT2 93 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 TCAF2A6NFQ2 919 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 FAM47DPA6NHR8 397 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 LRRC72A6NJI9 287 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 TTC34A8MYJ7 566 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 C1QTNF9BB2RNN3 333 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 PES1O00541 588 aaKnown RBP12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 HYAL3O43820 417 aaPredicted RBP12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 TOP3BO95985 862 aaKnown RBP12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 C1QTNF9P0C862 333 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 SLC8A1P32418 973 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 CTSOP43234 321 aaPredicted RBP12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 GRIA4P48058 902 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 PLK1P53350 603 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 FAM193AP78312 1265 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 ZNF177Q13360 481 aaPredicted RBP12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 AUHQ13825 339 aaKnown RBP12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 RAPGEF1Q13905 1077 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 DPCR1Q3MIW9 517 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 MIIPQ5JXC2 388 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 FBXL22Q6P050 247 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 OLFML1Q6UWY5 402 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 FAM183BPQ6ZVS7 135 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 SND1Q7KZF4 910 aaKnown RBP eCLIP12.8□□□□□ -0.361e-13■■■□□ 15.3
CAPRIN1-213ENST00000533562 SLC26A9Q7LBE3 791 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 ADAT2Q7Z6V5 191 aaKnown RBP12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 MMAAQ8IVH4 418 aaKnown RBP12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 TMEM35BQ8NCS4 154 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 ZNF397Q8NF99 534 aaPredicted RBP12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 SKA1Q96BD8 255 aa12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 RPL10LQ96L21 214 aaKnown RBP12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 RPRD1AQ96P16 312 aaPredicted RBP12.8□□□□□ -0.36
CAPRIN1-213ENST00000533562 NUP62CLQ9H1M0 184 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms