RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 LCA5LO95447 670 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 GUCA1CO95843 209 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 HLA-DPA1P20036 260 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 MAP2K5Q13163 448 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 SCARA3Q6AZY7 606 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 LGMNQ99538 433 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 ELOVL6Q9H5J4 265 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 ARHGAP28Q9P2N2 729 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 CDH9Q9ULB4 789 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 CRYL1Q9Y2S2 319 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 FLT3P36888 993 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 TUFMP49411 452 aaKnown RBP17.9■□□□□ 0.46
PHRF1-205ENST00000533464 PRKAA2P54646 552 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 BTG3Q14201 252 aaPredicted RBP17.9■□□□□ 0.46
PHRF1-205ENST00000533464 CST3P01034 146 aaPredicted RBP17.9■□□□□ 0.46
PHRF1-205ENST00000533464 ATP4AP20648 1035 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 WASHC2DQ5SRD0 308 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 UNC5AQ6ZN44 842 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 RASGEF1CQ8N431 466 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 LRRC52Q8N7C0 313 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 RNF148Q8N7C7 305 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 UCMAQ8WVF2 138 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 MID1IP1Q9NPA3 183 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 NMRK1Q9NWW6 199 aa17.9■□□□□ 0.46
PHRF1-205ENST00000533464 DDX3YO15523 660 aaKnown RBP17.89■□□□□ 0.46
PHRF1-205ENST00000533464 PBLDP30039 288 aaPredicted RBP17.89■□□□□ 0.46
PHRF1-205ENST00000533464 MTA1Q13330 715 aa17.89■□□□□ 0.46
PHRF1-205ENST00000533464 GLT6D1Q7Z4J2 308 aa17.89■□□□□ 0.46
PHRF1-205ENST00000533464 MRPL9Q9BYD2 267 aaKnown RBP17.89■□□□□ 0.46
PHRF1-205ENST00000533464 SCN3BQ9NY72 215 aa17.89■□□□□ 0.46
PHRF1-205ENST00000533464 UBA2Q9UBT2 640 aaPredicted RBP17.89■□□□□ 0.46
PHRF1-205ENST00000533464 ANKRD6Q9Y2G4 727 aa17.89■□□□□ 0.46
PHRF1-205ENST00000533464 PEAK1Q9H792 1746 aa17.89■□□□□ 0.46
PHRF1-205ENST00000533464 FAM95CA0A1B0GW59 222 aa17.89■□□□□ 0.45
PHRF1-205ENST00000533464 CYP51A1Q16850 503 aa17.89■□□□□ 0.45
PHRF1-205ENST00000533464 TCHHL1Q5QJ38 904 aaPredicted RBP17.89■□□□□ 0.45
PHRF1-205ENST00000533464 ANKS6Q68DC2 871 aa17.89■□□□□ 0.45
PHRF1-205ENST00000533464 RNPEPQ9H4A4 650 aa17.89■□□□□ 0.45
PHRF1-205ENST00000533464 NXF3Q9H4D5 531 aaKnown RBP17.89■□□□□ 0.45
PHRF1-205ENST00000533464 RMND5AQ9H871 391 aa17.89■□□□□ 0.45
PHRF1-205ENST00000533464 PTPRHQ9HD43 1115 aa17.89■□□□□ 0.45
PHRF1-205ENST00000533464 PCDHB12Q9Y5F1 795 aa17.89■□□□□ 0.45
PHRF1-205ENST00000533464 KANSL1LA0AUZ9 987 aa17.89■□□□□ 0.45
PHRF1-205ENST00000533464 CLDN5O00501 218 aa17.89■□□□□ 0.45
PHRF1-205ENST00000533464 B4GALT4O60513 344 aa17.89■□□□□ 0.45
PHRF1-205ENST00000533464 CYP2C18P33260 490 aa17.89■□□□□ 0.45
PHRF1-205ENST00000533464 HALP42357 657 aa17.89■□□□□ 0.45
PHRF1-205ENST00000533464 SERPINH1P50454 418 aaKnown RBP17.89■□□□□ 0.45
PHRF1-205ENST00000533464 RAP1GDS1P52306 607 aa17.89■□□□□ 0.45
PHRF1-205ENST00000533464 NR1H4Q96RI1 486 aaPredicted RBP17.89■□□□□ 0.45
PHRF1-205ENST00000533464 POLR1EQ9GZS1 481 aaKnown RBP17.89■□□□□ 0.45
PHRF1-205ENST00000533464 ST3GAL5Q9UNP4 418 aa17.89■□□□□ 0.45
PHRF1-205ENST00000533464 NFKB1P19838 968 aa17.89■□□□□ 0.45
PHRF1-205ENST00000533464 CERS2Q96G23 380 aa17.89■□□□□ 0.45
PHRF1-205ENST00000533464 HMX1Q9NP08 348 aaPredicted RBP17.89■□□□□ 0.45
PHRF1-205ENST00000533464 SAR1AQ9NR31 198 aa17.89■□□□□ 0.45
PHRF1-205ENST00000533464 SEPT3Q9UH03 358 aa17.89■□□□□ 0.45
PHRF1-205ENST00000533464 COG5Q9UP83 839 aa17.89■□□□□ 0.45
PHRF1-205ENST00000533464 FGF10O15520 208 aaPredicted RBP17.88■□□□□ 0.45
PHRF1-205ENST00000533464 KIF1CO43896 1103 aaKnown RBP17.88■□□□□ 0.45
PHRF1-205ENST00000533464 PEX10O60683 326 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 PIGNO95427 931 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 ERCC2P18074 760 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 CCNG1P51959 295 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 FUKQ8N0W3 1084 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 ST6GALNAC4Q9H4F1 302 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 PIF1Q9H611 641 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 SUFUQ9UMX1 484 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 STARD13Q9Y3M8 1113 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 PLIN4Q96Q06 1357 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 CCNT2O60583 730 aaKnown RBP17.88■□□□□ 0.45
PHRF1-205ENST00000533464 KATNA1O75449 491 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 USP1O94782 785 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 SKIV2L2P42285 1042 aaKnown RBP17.88■□□□□ 0.45
PHRF1-205ENST00000533464 MATKP42679 507 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 ADCK1Q86TW2 530 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 PLD3Q8IV08 490 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 MIER2Q8N344 545 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 MRPL45Q9BRJ2 306 aaKnown RBP17.88■□□□□ 0.45
PHRF1-205ENST00000533464 KLHL4Q9C0H6 718 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 SLC7A5P2Q9GIP4 190 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 ACSS3Q9H6R3 686 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 LOC102724159A0A0B4J2E5 919 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 C4BPAP04003 597 aaKnown RBP17.88■□□□□ 0.45
PHRF1-205ENST00000533464 ZNF7P17097 686 aaPredicted RBP17.88■□□□□ 0.45
PHRF1-205ENST00000533464 PSMC3P17980 439 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 MAPK1P28482 360 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 HIRAP54198 1017 aaPredicted RBP17.88■□□□□ 0.45
PHRF1-205ENST00000533464 PWP2Q15269 919 aaKnown RBP17.88■□□□□ 0.45
PHRF1-205ENST00000533464 PCID2Q5JVF3 399 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 SNX30Q5VWJ9 437 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 FAM9CQ8IZT9 166 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 SIKE1Q9BRV8 207 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 KCNK4Q9NYG8 393 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 FMN2Q9NZ56 1722 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 F8W810 466 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 ARIH2O95376 493 aa17.88■□□□□ 0.45
PHRF1-205ENST00000533464 ALOX15P16050 662 aaPredicted RBP17.88■□□□□ 0.45
PHRF1-205ENST00000533464 CRYBB1P53674 252 aaPredicted RBP17.88■□□□□ 0.45
PHRF1-205ENST00000533464 NAGLUP54802 743 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms