RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 SETD3Q86TU7 594 aaPredicted RBP10.15□□□□□ -0.78
NUP98-220ENST00000533346 KBTBD6Q86V97 674 aa10.15□□□□□ -0.78
NUP98-220ENST00000533346 OR2T3Q8NH03 318 aa10.15□□□□□ -0.78
NUP98-220ENST00000533346 JOSD2Q8TAC2 188 aa10.15□□□□□ -0.78
NUP98-220ENST00000533346 FNIP1Q8TF40 1166 aa10.15□□□□□ -0.78
NUP98-220ENST00000533346 RXFP2Q8WXD0 754 aa10.15□□□□□ -0.78
NUP98-220ENST00000533346 RNF34Q969K3 372 aa10.15□□□□□ -0.78
NUP98-220ENST00000533346 IGSF8Q969P0 613 aa10.15□□□□□ -0.78
NUP98-220ENST00000533346 SPACA7Q96KW9 195 aa10.15□□□□□ -0.78
NUP98-220ENST00000533346 MRGPRX3Q96LB0 322 aa10.15□□□□□ -0.78
NUP98-220ENST00000533346 CFAP57Q96MR6 1250 aa10.15□□□□□ -0.78
NUP98-220ENST00000533346 ISCUQ9H1K1 167 aa10.15□□□□□ -0.78
NUP98-220ENST00000533346 HAUS4Q9H6D7 363 aa10.15□□□□□ -0.78
NUP98-220ENST00000533346 METTL5Q9NRN9 209 aaKnown RBP10.15□□□□□ -0.78
NUP98-220ENST00000533346 CACNA2D2Q9NY47 1150 aa10.15□□□□□ -0.78
NUP98-220ENST00000533346 USP36Q9P275 1121 aaKnown RBP10.15□□□□□ -0.78
NUP98-220ENST00000533346 ZNF212Q9UDV6 495 aa10.15□□□□□ -0.78
NUP98-220ENST00000533346 SCML1Q9UN30 329 aa10.15□□□□□ -0.78
NUP98-220ENST00000533346 OR51B4Q9Y5P0 310 aa10.15□□□□□ -0.78
NUP98-220ENST00000533346 RIF1Q5UIP0 2472 aaKnown RBP10.15□□□□□ -0.78
NUP98-220ENST00000533346 PTPRZ1P23471 2315 aaPredicted RBP10.15□□□□□ -0.79
NUP98-220ENST00000533346 IGHV1OR15-9A0A0B4J2B8 117 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 MED19A0JLT2 244 aaPredicted RBP10.14□□□□□ -0.79
NUP98-220ENST00000533346 PRR5-ARHGAP8B1AHC4 643 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 C10orf142B7Z368 130 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 H0Y626 953 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 RTN2O75298 545 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 TPM3P06753 285 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 PDGFRAP16234 1089 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 GPD1P21695 349 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 SDHBP21912 280 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 PRKCHP24723 683 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 OXTRP30559 389 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 ADRA1BP35368 520 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 HOXD12P35452 270 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 HDAC4P56524 1084 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 ARHGAP8P85298 464 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 ARID5AQ03989 594 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 CDH18Q13634 790 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 ELF2Q15723 593 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 ASIC2Q16515 512 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 HNRNPA1L2Q32P51 320 aaKnown RBP10.14□□□□□ -0.79
NUP98-220ENST00000533346 ARL13BQ3SXY8 428 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 MANEALQ5VSG8 457 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 E4F1Q66K89 784 aaPredicted RBP10.14□□□□□ -0.79
NUP98-220ENST00000533346 SERPINA13PQ6UXR4 307 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 PRR23BQ6ZRT6 265 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 ZNF571Q7Z3V5 609 aaPredicted RBP10.14□□□□□ -0.79
NUP98-220ENST00000533346 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.14□□□□□ -0.79
NUP98-220ENST00000533346 C14orf80Q86SX3 495 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 CFAP52Q8N1V2 620 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 CARNMT1Q8N4J0 409 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 DCLK2Q8N568 766 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 ZNF419Q96HQ0 510 aaPredicted RBP10.14□□□□□ -0.79
NUP98-220ENST00000533346 SELENOOQ9BVL4 669 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 TPSD1Q9BZJ3 242 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 CIPCQ9C0C6 399 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 MKRN2Q9H000 416 aaKnown RBP10.14□□□□□ -0.79
NUP98-220ENST00000533346 PCED1AQ9H1Q7 454 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 ZDHHC4Q9NPG8 344 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 PRSS16Q9NQE7 514 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 STIM2Q9P246 746 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 MBD1Q9UIS9 605 aaPredicted RBP10.14□□□□□ -0.79
NUP98-220ENST00000533346 VANGL2Q9ULK5 521 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 ERVW-1Q9UQF0 538 aa10.14□□□□□ -0.79
NUP98-220ENST00000533346 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.14□□□□□ -0.79
NUP98-220ENST00000533346 KMT2BQ9UMN6 2715 aaPredicted RBP10.13□□□□□ -0.79
NUP98-220ENST00000533346 GVINP1Q7Z2Y8 2422 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.13□□□□□ -0.79
NUP98-220ENST00000533346 BCLAF3A2AJT9 711 aaKnown RBP10.13□□□□□ -0.79
NUP98-220ENST00000533346 EIF3CLB5ME19 914 aaKnown RBP10.13□□□□□ -0.79
NUP98-220ENST00000533346 GOLGA8SH3BPF8 625 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 DDX3XO00571 662 aaKnown RBP eCLIP10.13□□□□□ -0.79
NUP98-220ENST00000533346 CBFA2T2O43439 604 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 SYNCRIPO60506 623 aaKnown RBP10.13□□□□□ -0.79
NUP98-220ENST00000533346 SERPING1P05155 500 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 EPHX1P07099 455 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 MYBL1P10243 752 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 CSKP41240 450 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 WASP42768 502 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 ID4P47928 161 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 LIMK1P53667 647 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 ATXN1P54253 815 aaKnown RBP10.13□□□□□ -0.79
NUP98-220ENST00000533346 ECT2LQ008S8 904 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 LMNB2Q03252 620 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 KLHL30Q0D2K2 578 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 ZNF177Q13360 481 aaPredicted RBP10.13□□□□□ -0.79
NUP98-220ENST00000533346 MAMLD1Q13495 774 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 ACAP1Q15027 740 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 LRRC31Q6UY01 552 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 TMPRSS6Q8IU80 811 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 APCDD1Q8J025 514 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 EMC1Q8N766 993 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 CADM4Q8NFZ8 388 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 HMGB4Q8WW32 186 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 SORCS1Q8WY21 1168 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 FAM131CQ96AQ9 280 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 TRIM11Q96F44 468 aa10.13□□□□□ -0.79
NUP98-220ENST00000533346 RPRD1AQ96P16 312 aaPredicted RBP10.13□□□□□ -0.79
NUP98-220ENST00000533346 EIF3CQ99613 913 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms