RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 MGEA5O60502 916 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 DUSP11O75319 330 aaKnown RBP15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 LYPLA1O75608 230 aaPredicted RBP15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 AP2A1O95782 977 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 POLBP06746 335 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 KCNA4P22459 653 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 HCAR3P49019 387 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 ZNF157P51786 506 aaPredicted RBP15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 RPL10AP62906 217 aaKnown RBP15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 KCTD11Q693B1 232 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 KYAT3Q6YP21 454 aaKnown RBP15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 TREML1Q86YW5 311 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 ZSCAN18Q8TBC5 510 aaPredicted RBP15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 MYLPFQ96A32 169 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 CERS2Q96G23 380 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 SMARCD1Q96GM5 515 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 NAT9Q9BTE0 207 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 MLPHQ9BV36 600 aaPredicted RBP15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 WDCPQ9H6R7 721 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 CSNK1G1Q9HCP0 422 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 TMLHEQ9NVH6 421 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 ZFATQ9P243 1243 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 HBS1LQ9Y450 684 aaKnown RBP15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 PTCH2Q9Y6C5 1203 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 E2F8A0AVK6 867 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 TNPO2O14787 897 aaKnown RBP15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 PLIN3O60664 434 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 HNRNPCL1O60812 293 aaKnown RBP15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 LRIG2O94898 1065 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 POMCP01189 267 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 BDNFP23560 247 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 BRCC3P46736 316 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 CXCR3P49682 368 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 STX3Q13277 289 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 KRT72Q14CN4 511 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 MBLAC2Q68D91 279 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 RASSF3Q86WH2 238 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 RAB3IL1Q8TBN0 382 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 ACMSDQ8TDX5 336 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 HASPINQ8TF76 798 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 AZIN2Q96A70 460 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 ZNF778Q96MU6 729 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 TMEM209Q96SK2 561 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 AGAP2Q99490 1192 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 APOL2Q9BQE5 337 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 EBF4Q9BQW3 602 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 RNPEPL1Q9HAU8 725 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 CHST12Q9NRB3 414 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 ZNF358Q9NW07 568 aa15.71■□□□□ 0.11
CACNA1E-208ENST00000533229 ZCWPW2A0A1B0GU75 182 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 CAPN14A8MX76 684 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 FGF3P11487 239 aaPredicted RBP15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 CALB2P22676 271 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 ELF1P32519 619 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 GARSP41250 739 aaKnown RBP15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 PDE1BQ01064 536 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 MGAT3Q09327 533 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 PCLAFQ15004 111 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 CERCAMQ5T4B2 595 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 STXBP5Q5T5C0 1151 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 CD300LGQ6UXG3 332 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 CMC1Q7Z7K0 106 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 TMEM135Q86UB9 458 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 TAC4Q86UU9 113 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 LRRTM3Q86VH5 581 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 CRLF3Q8IUI8 442 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 GIMAP7Q8NHV1 300 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 DPF3Q92784 378 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 N4BP2L2Q92802 583 aaPredicted RBP15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 MFSD3Q96ES6 412 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 CELF6Q96J87 481 aaKnown RBP15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 TACO1Q9BSH4 297 aaKnown RBP15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 MTG1Q9BT17 334 aaPredicted RBP15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 UBP1Q9NZI7 540 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 TMEM216Q9P0N5 145 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 VANGL2Q9ULK5 521 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 GIT1Q9Y2X7 761 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 GYG2O15488 501 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 B3GAT3O94766 335 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 ESRRAP11474 423 aaPredicted RBP15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 NFKB1P19838 968 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 ARRB2P32121 409 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 CPA2P48052 419 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 GALNT2Q10471 571 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 ARL13BQ3SXY8 428 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 FAM171BQ6P995 826 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 C4orf50Q6ZRC1 276 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 PDZD4Q76G19 769 aaPredicted RBP15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 SERINC5Q86VE9 423 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 DNAAF3Q8N9W5 541 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 FBXO27Q8NI29 283 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 KCNV2Q8TDN2 545 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 ZNF669Q96BR6 464 aaPredicted RBP15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 HDAC11Q96DB2 347 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 ATXN7L3BQ96GX2 97 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 TUBB6Q9BUF5 446 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 CASS4Q9NQ75 786 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 THAP1Q9NVV9 213 aa15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 ZNF638Q14966 1978 aaKnown RBP15.7■□□□□ 0.1
CACNA1E-208ENST00000533229 F8W810 466 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms