RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 NUGGCQ68CJ6 796 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 SPATS2Q86XZ4 545 aaKnown RBP13.5□□□□□ -0.25
COPB1-209ENST00000533096 APCDD1Q8J025 514 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 LGI2Q8N0V4 545 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 CLEC4CQ8WTT0 213 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 LMLNQ96KR4 655 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 LGMNQ99538 433 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 DDX50Q9BQ39 737 aaKnown RBP13.5□□□□□ -0.25
COPB1-209ENST00000533096 CNGB3Q9NQW8 809 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 CA5BQ9Y2D0 317 aa13.5□□□□□ -0.25
COPB1-209ENST00000533096 ASXL3Q9C0F0 2248 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 EDDM13A0A1B0GTR0 161 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 PYCARD-AS1I3L0S3 204 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 CETN3O15182 167 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 YKT6O15498 198 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 IRAK2O43187 625 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 SIGLEC6O43699 453 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 BNIP3LO60238 219 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 GABBR2O75899 941 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 MT-CO3P00414 261 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 MYF5P13349 255 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 VAV1P15498 845 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 C5AR1P21730 350 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 NNMTP40261 264 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 STK19P49842 368 aaPredicted RBP13.49□□□□□ -0.25
COPB1-209ENST00000533096 PPP2CBP62714 309 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 PPP2CAP67775 309 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 DAB2P98082 770 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 INSM1Q01101 510 aaPredicted RBP13.49□□□□□ -0.25
COPB1-209ENST00000533096 CUL2Q13617 745 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 DCAF6Q58WW2 860 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 PMF1Q6P1K2 205 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 TMC6Q7Z403 805 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 SPACA3Q8IXA5 215 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 ZNF557Q8N988 423 aaPredicted RBP13.49□□□□□ -0.25
COPB1-209ENST00000533096 KCTD13Q8WZ19 329 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 TFAP2BQ92481 460 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 KLK6Q92876 244 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 PRICKLE1Q96MT3 831 aaPredicted RBP13.49□□□□□ -0.25
COPB1-209ENST00000533096 MYOCQ99972 504 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 NUCKS1Q9H1E3 243 aaKnown RBP13.49□□□□□ -0.25
COPB1-209ENST00000533096 ADAMTS1Q9UHI8 967 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 FZD4Q9ULV1 537 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 NAALADL1Q9UQQ1 740 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 PCDHB4Q9Y5E5 795 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 IGSF10Q6WRI0 2623 aa13.49□□□□□ -0.25
COPB1-209ENST00000533096 TEX51A0A1B0GUA7 166 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 J3QKU1 62 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 TRIM38O00635 465 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 FFAR2O15552 330 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 LTFP02788 710 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 MPOP05164 745 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 SRPRAP08240 638 aaKnown RBP13.48□□□□□ -0.25
COPB1-209ENST00000533096 SETSIPP0DME0 302 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 C7P10643 843 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 EPB41P11171 864 aaKnown RBP13.48□□□□□ -0.25
COPB1-209ENST00000533096 ZNF18P17022 549 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 CMA1P23946 247 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 SYKP43405 635 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 RXRGP48443 463 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 METAP1P53582 386 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 ADPRHP54922 357 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 YWHAEP62258 255 aaKnown RBP13.48□□□□□ -0.25
COPB1-209ENST00000533096 TLE3Q04726 772 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 ILKQ13418 452 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 NFIL3Q16649 462 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 CBWD6Q4V339 395 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 MS4A13Q5J8X5 152 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 CBWD3Q5JTY5 395 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 CBWD5Q5RIA9 395 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 ARHGAP40Q5TG30 622 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 SMYD4Q8IYR2 804 aaPredicted RBP13.48□□□□□ -0.25
COPB1-209ENST00000533096 MFSD2AQ8NA29 543 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 SNIP1Q8TAD8 396 aaKnown RBP13.48□□□□□ -0.25
COPB1-209ENST00000533096 PTPRN2Q92932 1015 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 FAXDC2Q96IV6 333 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 ERVMER34-1Q9H9K5 563 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 CPNE5Q9HCH3 593 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 ST7Q9NRC1 585 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 WDR70Q9NW82 654 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 USP25Q9UHP3 1055 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 XPO7Q9UIA9 1087 aaKnown RBP13.48□□□□□ -0.25
COPB1-209ENST00000533096 KIAA1257Q9ULG3 409 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 PCDHB1Q9Y5F3 818 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 LAMA5O15230 3695 aa13.48□□□□□ -0.25
COPB1-209ENST00000533096 APC2O95996 2303 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 O00370 1275 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 SLC31A1O15431 190 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 RHOBTB3O94955 611 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 LUC7L3O95232 432 aaKnown RBP13.47□□□□□ -0.25
COPB1-209ENST00000533096 ADH1BP00325 375 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 IGLV3-27P01718 113 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 KRT10P13645 584 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 NDUFA8P51970 172 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 E2F1Q01094 437 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 PKP1Q13835 747 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 HS1BP3Q53T59 392 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 ZC3H12AQ5D1E8 599 aaKnown RBP13.47□□□□□ -0.25
COPB1-209ENST00000533096 RAP1GAP2Q684P5 730 aa13.47□□□□□ -0.25
COPB1-209ENST00000533096 NAPEPLDQ6IQ20 393 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms