RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 NUMBP49757 651 aa19.59■□□□□ 0.73
SMPD1-205ENST00000531303 CKAP4Q07065 602 aaKnown RBP19.59■□□□□ 0.73
SMPD1-205ENST00000531303 SNX1Q13596 522 aa19.59■□□□□ 0.73
SMPD1-205ENST00000531303 SMAD2Q15796 467 aaKnown RBP19.59■□□□□ 0.73
SMPD1-205ENST00000531303 C5orf22Q49AR2 442 aa19.59■□□□□ 0.73
SMPD1-205ENST00000531303 MPPE1Q53F39 396 aa19.59■□□□□ 0.73
SMPD1-205ENST00000531303 LY6G5CQ5SRR4 150 aa19.59■□□□□ 0.73
SMPD1-205ENST00000531303 NLRP14Q86W24 1093 aa19.59■□□□□ 0.73
SMPD1-205ENST00000531303 MFSD6LQ8IWD5 586 aa19.59■□□□□ 0.73
SMPD1-205ENST00000531303 ADGRG2Q8IZP9 1017 aa19.59■□□□□ 0.73
SMPD1-205ENST00000531303 CARNMT1Q8N4J0 409 aa19.59■□□□□ 0.73
SMPD1-205ENST00000531303 NPWQ8N729 165 aa19.59■□□□□ 0.73
SMPD1-205ENST00000531303 ATG4AQ8WYN0 398 aa19.59■□□□□ 0.73
SMPD1-205ENST00000531303 EBF3Q9H4W6 596 aa19.59■□□□□ 0.73
SMPD1-205ENST00000531303 SPHK2Q9NRA0 654 aa19.59■□□□□ 0.73
SMPD1-205ENST00000531303 LIMD1Q9UGP4 676 aa19.59■□□□□ 0.73
SMPD1-205ENST00000531303 NEDD8-MDP1E9PL57 170 aa19.58■□□□□ 0.72
SMPD1-205ENST00000531303 GFRA2O00451 464 aa19.58■□□□□ 0.72
SMPD1-205ENST00000531303 IL9P15248 144 aa19.58■□□□□ 0.72
SMPD1-205ENST00000531303 PSMC3P17980 439 aa19.58■□□□□ 0.72
SMPD1-205ENST00000531303 OR1E1P30953 314 aa19.58■□□□□ 0.72
SMPD1-205ENST00000531303 OTUD4Q01804 1114 aaKnown RBP19.58■□□□□ 0.72
SMPD1-205ENST00000531303 SLC10A2Q12908 348 aaPredicted RBP19.58■□□□□ 0.72
SMPD1-205ENST00000531303 HTR4Q13639 388 aa19.58■□□□□ 0.72
SMPD1-205ENST00000531303 SIX1Q15475 284 aaPredicted RBP19.58■□□□□ 0.72
SMPD1-205ENST00000531303 EML3Q32P44 896 aa19.58■□□□□ 0.72
SMPD1-205ENST00000531303 B4GALNT4Q76KP1 1039 aa19.58■□□□□ 0.72
SMPD1-205ENST00000531303 TP53INP2Q8IXH6 220 aa19.58■□□□□ 0.72
SMPD1-205ENST00000531303 ACTL9Q8TC94 416 aa19.58■□□□□ 0.72
SMPD1-205ENST00000531303 LRRN4Q8WUT4 740 aa19.58■□□□□ 0.72
SMPD1-205ENST00000531303 MAIP1Q8WWC4 291 aa19.58■□□□□ 0.72
SMPD1-205ENST00000531303 P3H4Q92791 437 aa19.58■□□□□ 0.72
SMPD1-205ENST00000531303 IRF7Q92985 503 aa19.58■□□□□ 0.72
SMPD1-205ENST00000531303 OTUB2Q96DC9 234 aa19.58■□□□□ 0.72
SMPD1-205ENST00000531303 CARD6Q9BX69 1037 aa19.58■□□□□ 0.72
SMPD1-205ENST00000531303 BBS2Q9BXC9 721 aa19.58■□□□□ 0.72
SMPD1-205ENST00000531303 TMEM248Q9NWD8 314 aa19.58■□□□□ 0.72
SMPD1-205ENST00000531303 MYO10Q9HD67 2058 aa19.58■□□□□ 0.72
SMPD1-205ENST00000531303 PRUNE2Q8WUY3 3088 aa19.58■□□□□ 0.72
SMPD1-205ENST00000531303 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.57■□□□□ 0.72
SMPD1-205ENST00000531303 ECI2O75521 394 aa19.57■□□□□ 0.72
SMPD1-205ENST00000531303 TGM2P21980 687 aa19.57■□□□□ 0.72
SMPD1-205ENST00000531303 GDI1P31150 447 aa19.57■□□□□ 0.72
SMPD1-205ENST00000531303 CDH4P55283 916 aa19.57■□□□□ 0.72
SMPD1-205ENST00000531303 TNK2Q07912 1038 aa19.57■□□□□ 0.72
SMPD1-205ENST00000531303 C2orf54Q08AI8 447 aa19.57■□□□□ 0.72
SMPD1-205ENST00000531303 ZNF177Q13360 481 aaPredicted RBP19.57■□□□□ 0.72
SMPD1-205ENST00000531303 PAFAH1B3Q15102 231 aaKnown RBP19.57■□□□□ 0.72
SMPD1-205ENST00000531303 DHCR24Q15392 516 aa19.57■□□□□ 0.72
SMPD1-205ENST00000531303 RHBDF2Q6PJF5 856 aa19.57■□□□□ 0.72
SMPD1-205ENST00000531303 TTC8Q8TAM2 541 aa19.57■□□□□ 0.72
SMPD1-205ENST00000531303 SHROOM3Q8TF72 1996 aa19.56■□□□□ 0.72
SMPD1-205ENST00000531303 GOLGA6L10A0A0M3HER8 536 aa19.56■□□□□ 0.72
SMPD1-205ENST00000531303 A0A1B0GVM2 712 aa19.56■□□□□ 0.72
SMPD1-205ENST00000531303 TCAF2A6NFQ2 919 aa19.56■□□□□ 0.72
SMPD1-205ENST00000531303 ANHXE9PGG2 379 aa19.56■□□□□ 0.72
SMPD1-205ENST00000531303 H0Y626 953 aa19.56■□□□□ 0.72
SMPD1-205ENST00000531303 APOC4-APOC2K7ER74 178 aa19.56■□□□□ 0.72
SMPD1-205ENST00000531303 DFFAO00273 331 aa19.56■□□□□ 0.72
SMPD1-205ENST00000531303 CLDN11O75508 207 aa19.56■□□□□ 0.72
SMPD1-205ENST00000531303 APOC2P02655 101 aa19.56■□□□□ 0.72
SMPD1-205ENST00000531303 TTC39BQ5VTQ0 682 aaPredicted RBP19.56■□□□□ 0.72
SMPD1-205ENST00000531303 ZC3H18Q86VM9 953 aaKnown RBP19.56■□□□□ 0.72
SMPD1-205ENST00000531303 PRELID2Q8N945 189 aa19.56■□□□□ 0.72
SMPD1-205ENST00000531303 TRMT61BQ9BVS5 477 aaKnown RBP19.56■□□□□ 0.72
SMPD1-205ENST00000531303 KLC2Q9H0B6 622 aa19.56■□□□□ 0.72
SMPD1-205ENST00000531303 L2HGDHQ9H9P8 463 aa19.56■□□□□ 0.72
SMPD1-205ENST00000531303 PRDM16Q9HAZ2 1276 aa19.56■□□□□ 0.72
SMPD1-205ENST00000531303 RBM12Q9NTZ6 932 aaKnown RBP19.56■□□□□ 0.72
SMPD1-205ENST00000531303 DTLQ9NZJ0 730 aa19.56■□□□□ 0.72
SMPD1-205ENST00000531303 SPTBN5Q9NRC6 3674 aaKnown RBP19.56■□□□□ 0.72
SMPD1-205ENST00000531303 KIF26AQ9ULI4 1882 aaPredicted RBP19.56■□□□□ 0.72
SMPD1-205ENST00000531303 WASH4PA8MWX3 477 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 LUC7L3O95232 432 aaKnown RBP19.55■□□□□ 0.72
SMPD1-205ENST00000531303 CYP17A1P05093 508 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 RHOCP08134 193 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 HOXD9P28356 352 aaPredicted RBP19.55■□□□□ 0.72
SMPD1-205ENST00000531303 SERPINB6P35237 376 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 FCHO2Q0JRZ9 810 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 CDH18Q13634 790 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 PDGFRLQ15198 375 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 FYB2Q5VWT5 728 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 CHST9Q7L1S5 443 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 ZNF354CQ86Y25 554 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 CCDC117Q8IWD4 279 aaPredicted RBP19.55■□□□□ 0.72
SMPD1-205ENST00000531303 KLHL7Q8IXQ5 586 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 KIAA1958Q8N8K9 716 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 NAT16Q8N8M0 369 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 TTC13Q8NBP0 860 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 SPATA4Q8NEY3 305 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 DEPDC1BQ8WUY9 529 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 ATP2A3Q93084 1043 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 MAGOHBQ96A72 148 aaKnown RBP19.55■□□□□ 0.72
SMPD1-205ENST00000531303 FAM83CQ9BQN1 747 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 SLC39A8Q9C0K1 460 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 C10orf88Q9H8K7 445 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 ZNF212Q9UDV6 495 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 CLEC4EQ9ULY5 219 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 FAM50BQ9Y247 325 aa19.55■□□□□ 0.72
SMPD1-205ENST00000531303 H7C0C1 242 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms