RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 CASP5P51878 434 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 ADPRHP54922 357 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 EHHADHQ08426 723 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 PDE4CQ08493 712 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 SRSF6Q13247 344 aaKnown RBP8.58□□□□□ -1.04
CD44-232ENST00000531118 DUOXA2Q1HG44 320 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 WDR72Q3MJ13 1102 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 HS1BP3Q53T59 392 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 SCARA5Q6ZMJ2 495 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 TRAPPC11Q7Z392 1133 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 CBWD2Q8IUF1 395 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 FAM217AQ8IXS0 508 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 AHI1Q8N157 1196 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.58□□□□□ -1.04
CD44-232ENST00000531118 MFSD2AQ8NA29 543 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 MAPK15Q8TD08 544 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 DDI1Q8WTU0 396 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 LARP4BQ92615 738 aaKnown RBP8.58□□□□□ -1.04
CD44-232ENST00000531118 JAKMIP2Q96AA8 810 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 ITPKCQ96DU7 683 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 SGF29Q96ES7 293 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 CALML4Q96GE6 196 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 ATXN7L3BQ96GX2 97 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 CALR3Q96L12 384 aaKnown RBP8.58□□□□□ -1.04
CD44-232ENST00000531118 DCLK3Q9C098 648 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 MTG2Q9H4K7 406 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 SEL1LQ9UBV2 794 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 GGA2Q9UJY4 613 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 AGO1Q9UL18 857 aaKnown RBP8.58□□□□□ -1.04
CD44-232ENST00000531118 FZD4Q9ULV1 537 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 TPX2Q9ULW0 747 aaKnown RBP8.58□□□□□ -1.04
CD44-232ENST00000531118 SRPK3Q9UPE1 567 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 U3KQA8 63 aa8.58□□□□□ -1.04
CD44-232ENST00000531118 EFSO43281 561 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 LATO43561 262 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 GCNT3O95395 438 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 STAU1O95793 577 aaKnown RBP8.57□□□□□ -1.04
CD44-232ENST00000531118 DLDP09622 509 aaKnown RBP8.57□□□□□ -1.04
CD44-232ENST00000531118 GIMD1P0DJR0 217 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 SFTPCP11686 197 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 PABPC1P11940 636 aaKnown RBP8.57□□□□□ -1.04
CD44-232ENST00000531118 DUSP3P51452 185 aaPredicted RBP8.57□□□□□ -1.04
CD44-232ENST00000531118 MAP3K7CLP57077 242 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 SURF1Q15526 300 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 CST6Q15828 149 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 MBLAC2Q68D91 279 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 FOXR1Q6PIV2 292 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 USP53Q70EK8 1073 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 TADA2BQ86TJ2 420 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 ADIPOR2Q86V24 386 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 IQCHQ86VS3 1027 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 DENND1CQ8IV53 801 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 SLC25A45Q8N413 288 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 RASSF8Q8NHQ8 419 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 SLC2A14Q8TDB8 520 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 TNIP3Q96KP6 325 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 AK8Q96MA6 479 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 CGRRF1Q99675 332 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 FGFBP2Q9BYJ0 223 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 NEUROG2Q9H2A3 272 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 MRPL44Q9H9J2 332 aaKnown RBP8.57□□□□□ -1.04
CD44-232ENST00000531118 CSNK1G1Q9HCP0 422 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 ABCB8Q9NUT2 735 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 UCKL1Q9NWZ5 548 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 TBC1D7Q9P0N9 293 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 NAGPAQ9UK23 515 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 PLA2G4CQ9UP65 541 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 PCDHB11Q9Y5F2 797 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 PCDHA5Q9Y5H7 936 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 ENTPD2Q9Y5L3 495 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 RP1L1Q8IWN7 2480 aaPredicted RBP8.57□□□□□ -1.04
CD44-232ENST00000531118 CSMD1Q96PZ7 3565 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 FBN2P35556 2912 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 ITPR3Q14573 2671 aa8.57□□□□□ -1.04
CD44-232ENST00000531118 HHLA1C9JL84 531 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 KIAA0391O15091 583 aaKnown RBP8.56□□□□□ -1.04
CD44-232ENST00000531118 MAGEC1O60732 1142 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 SIN3BO75182 1162 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 ITGA2BP08514 1039 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 FAM200BP0CF97 657 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 TGM2P21980 687 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 DGKAP23743 735 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 PSMD8P48556 350 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 PDX1P52945 283 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 RIPPLY3P57055 190 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 ANAPC15P60006 121 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 EFEMP1Q12805 493 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 SFSWAPQ12872 951 aaKnown RBP8.56□□□□□ -1.04
CD44-232ENST00000531118 SKIDA1Q1XH10 827 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 ARL6IP4Q66PJ3 421 aaKnown RBP8.56□□□□□ -1.04
CD44-232ENST00000531118 CLEC20AQ6ZU45 233 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 SCD5Q86SK9 330 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 SYCP3Q8IZU3 236 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 ARL14Q8N4G2 192 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 AADATQ8N5Z0 425 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 WDR36Q8NI36 951 aaKnown RBP8.56□□□□□ -1.04
CD44-232ENST00000531118 ZNF564Q8TBZ8 553 aaPredicted RBP8.56□□□□□ -1.04
CD44-232ENST00000531118 IFI44Q8TCB0 444 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 WFDC5Q8TCV5 224 aa8.56□□□□□ -1.04
CD44-232ENST00000531118 MYO19Q96H55 970 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms