RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 DHX35Q9H5Z1 703 aaKnown RBP16.52■□□□□ 0.24
BRK1-201ENST00000530758 DNAJC17Q9NVM6 304 aaKnown RBP16.52■□□□□ 0.24
BRK1-201ENST00000530758 TMEM248Q9NWD8 314 aa16.52■□□□□ 0.24
BRK1-201ENST00000530758 RCOR3Q9P2K3 495 aaPredicted RBP16.52■□□□□ 0.24
BRK1-201ENST00000530758 MYO18AQ92614 2054 aaKnown RBP16.51■□□□□ 0.23
BRK1-201ENST00000530758 TMEM110-MUSTN1A8MSY1 372 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 ZNF487B1APH4 448 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 K7EQS6 105 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 TRIM24O15164 1050 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 ZSCAN12O43309 604 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 PSTPIP1O43586 416 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 KAT7O95251 611 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 CHRNB1P11230 501 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 CD72P21854 359 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 IL4RP24394 825 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 HLA-FP30511 346 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 GRSF1Q12849 480 aaKnown RBP eCLIP16.51■□□□□ 0.232e-8■□□□□ 10
BRK1-201ENST00000530758 PDK2Q15119 407 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 FBXO43Q4G163 708 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 ATP13A4Q4VNC1 1196 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 FSCBQ5H9T9 825 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 DGKKQ5KSL6 1271 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 CXorf57Q6NSI4 855 aaKnown RBP16.51■□□□□ 0.23
BRK1-201ENST00000530758 NUDT18Q6ZVK8 323 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 SETD3Q86TU7 594 aaPredicted RBP16.51■□□□□ 0.23
BRK1-201ENST00000530758 MFN1Q8IWA4 741 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 REXO1L1PQ8IX06 675 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 SYCE1Q8N0S2 351 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 TERB1Q8NA31 727 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 WFDC5Q8TCV5 224 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 KCNV2Q8TDN2 545 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 BHMTQ93088 406 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 ZWILCHQ9H900 591 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 TBC1D17Q9HA65 648 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 PCDH18Q9HCL0 1135 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 ARHGEF4Q9NR80 690 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 GPATCH2LQ9NWQ4 482 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 MPP6Q9NZW5 540 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 CWC15Q9P013 229 aaKnown RBP16.51■□□□□ 0.23
BRK1-201ENST00000530758 KIAA1522Q9P206 1035 aaPredicted RBP16.51■□□□□ 0.23
BRK1-201ENST00000530758 STIM2Q9P246 746 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 NUP205Q92621 2012 aa16.51■□□□□ 0.23
BRK1-201ENST00000530758 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.5■□□□□ 0.23
BRK1-201ENST00000530758 MACROD2A1Z1Q3 448 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 H0Y626 953 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 FGF10O15520 208 aaPredicted RBP16.5■□□□□ 0.23
BRK1-201ENST00000530758 TIMM44O43615 452 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 MOCS3O95396 460 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 APODP05090 189 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 CHRM1P11229 460 aaPredicted RBP16.5■□□□□ 0.23
BRK1-201ENST00000530758 TARSP26639 723 aaKnown RBP16.5■□□□□ 0.23
BRK1-201ENST00000530758 EPHB2P29323 1055 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 MAPKAPK2P49137 400 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 CLCN5P51795 746 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 NAP1L1P55209 391 aaKnown RBP16.5■□□□□ 0.23
BRK1-201ENST00000530758 ZNF177Q13360 481 aaPredicted RBP16.5■□□□□ 0.23
BRK1-201ENST00000530758 DMC1Q14565 340 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 SMTNL2Q2TAL5 461 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 ZNF783Q6ZMS7 281 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 NT5DC3Q86UY8 548 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 CCDC117Q8IWD4 279 aaPredicted RBP16.5■□□□□ 0.23
BRK1-201ENST00000530758 PRSS33Q8NF86 280 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 PJA1Q8NG27 643 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 ALG14Q96F25 216 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 CATSPERBQ9H7T0 1116 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 KCND1Q9NSA2 647 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.5■□□□□ 0.23
BRK1-201ENST00000530758 DDX56Q9NY93 547 aaKnown RBP16.5■□□□□ 0.23
BRK1-201ENST00000530758 DONSONQ9NYP3 566 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 GUCA1BQ9UMX6 200 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 MTF2Q9Y483 593 aaPredicted RBP16.5■□□□□ 0.23
BRK1-201ENST00000530758 PCDHA3Q9Y5H8 950 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 OR51B4Q9Y5P0 310 aa16.5■□□□□ 0.23
BRK1-201ENST00000530758 CXorf51AA0A1B0GTR3 108 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 ILVBLA1L0T0 632 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 FAM170BA6NMN3 283 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 PRRT4C9JH25 899 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 EEF2KO00418 725 aaKnown RBP16.49■□□□□ 0.23
BRK1-201ENST00000530758 NCAM2O15394 837 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 SPOPO43791 374 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 CREB3O43889 395 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 PALMO75781 387 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 GOT1P17174 413 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 KDELR1P24390 212 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 CTNNA2P26232 953 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 CD70P32970 193 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 SSR1P43307 286 aaKnown RBP16.49■□□□□ 0.23
BRK1-201ENST00000530758 RPS9P46781 194 aaKnown RBP16.49■□□□□ 0.23
BRK1-201ENST00000530758 PEX5P50542 639 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 TPI1P60174 286 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 LMAN2Q12907 356 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 CDH18Q13634 790 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 DPYSQ14117 519 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 DPYSL3Q14195 570 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 EIF4HQ15056 248 aaKnown RBP16.49■□□□□ 0.23
BRK1-201ENST00000530758 GEN1Q17RS7 908 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 C6orf118Q5T5N4 469 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 CWF19L1Q69YN2 538 aaKnown RBP16.49■□□□□ 0.23
BRK1-201ENST00000530758 MAMSTRQ6ZN01 415 aa16.49■□□□□ 0.23
BRK1-201ENST00000530758 RFX8Q6ZV50 586 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms