RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 NPR3P17342 541 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 DNAJB2P25686 324 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 CDH13P55290 713 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 SPDYAQ5MJ70 313 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 RNF43Q68DV7 783 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 GPR142Q7Z601 462 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 WDTC1Q8N5D0 677 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 PNPLA1Q8N8W4 532 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 DCBLD1Q8N8Z6 715 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 ANKRD52Q8NB46 1076 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 CERS2Q96G23 380 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 AGAP2Q99490 1192 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 CENPKQ9BS16 269 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 NMRAL1Q9HBL8 299 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 FAM50BQ9Y247 325 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 SMAPO00193 183 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 S100BP04271 92 aaPredicted RBP12.63□□□□□ -0.39
SCN3B-206ENST00000530277 SIX1Q15475 284 aaPredicted RBP12.63□□□□□ -0.39
SCN3B-206ENST00000530277 ZRANB3Q5FWF4 1079 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 RARS2Q5T160 578 aaKnown RBP12.63□□□□□ -0.39
SCN3B-206ENST00000530277 SYPL2Q5VXT5 272 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 RIPOR1Q6ZS17 1223 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 TMPRSS6Q8IU80 811 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 RBM15BQ8NDT2 890 aaKnown RBP12.63□□□□□ -0.39
SCN3B-206ENST00000530277 SHCBP1Q8NEM2 672 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 ADAM2Q99965 735 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 VPS33BQ9H267 617 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 POPDC2Q9HBU9 364 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 SOX13Q9UN79 622 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 MAP1BP46821 2468 aaKnown RBP12.63□□□□□ -0.39
SCN3B-206ENST00000530277 MYBPHLA2RUH7 354 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 C2CD4BA6NLJ0 364 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 GRIN3BO60391 1043 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 NDUFS3O75489 264 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 SERPINB8P50452 374 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 CACNA2D1P54289 1103 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 GALNTL6Q49A17 601 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 ANKRD20A4Q4UJ75 823 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 MFSD14CQ5VZR4 134 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 GIPC2Q8TF65 315 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 SLC44A1Q8WWI5 657 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 KCTD15Q96SI1 283 aaPredicted RBP12.63□□□□□ -0.39
SCN3B-206ENST00000530277 MUC3BQ9H195 1237 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 WARS2Q9UGM6 360 aaKnown RBP12.63□□□□□ -0.39
SCN3B-206ENST00000530277 CLUHO75153 1309 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 UBR2Q8IWV8 1755 aa12.63□□□□□ -0.39
SCN3B-206ENST00000530277 ANGPT2O15123 496 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 CHADO15335 359 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 ONECUT3O60422 494 aaPredicted RBP12.62□□□□□ -0.39
SCN3B-206ENST00000530277 TRIM13O60858 407 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 CHEK2O96017 543 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 SERPINE1P05121 402 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 ABHD2P08910 425 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 ETS2P15036 469 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 PSEN2P49810 448 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 CPT1AP50416 773 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 NRF1Q16656 503 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 SLC39A12Q504Y0 691 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 SLC35B2Q8TB61 432 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 ULK4Q96C45 1275 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 SLC38A7Q9NVC3 462 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 NKX1-2Q9UD57 310 aaPredicted RBP12.62□□□□□ -0.39
SCN3B-206ENST00000530277 DSEQ9UL01 958 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 SLC27A5Q9Y2P5 690 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 SIPA1L3O60292 1781 aaPredicted RBP12.62□□□□□ -0.39
SCN3B-206ENST00000530277 C9IYK1 514 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 E2F6O75461 281 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 RAG1P15918 1043 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 KLRC2P26717 231 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 GJA9P57773 515 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 SLC34A1Q06495 639 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 DDR2Q16832 855 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 C9orf57Q5W0N0 161 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 LCLAT1Q6UWP7 414 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 FBXO32Q969P5 355 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 PRR11Q96HE9 360 aaPredicted RBP12.62□□□□□ -0.39
SCN3B-206ENST00000530277 CCDC138Q96M89 665 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 ADAM7Q9H2U9 754 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 EPB41L4BQ9H329 900 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 THEGQ9P2T0 379 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 TUBGCP6Q96RT7 1819 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 TTC24A2A3L6 582 aaPredicted RBP12.62□□□□□ -0.39
SCN3B-206ENST00000530277 BTBD19C9JJ37 291 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 ZBTB24O43167 697 aaPredicted RBP12.62□□□□□ -0.39
SCN3B-206ENST00000530277 PGM3O95394 542 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 PSMG1O95456 288 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 CD52P31358 61 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 FSCN1Q16658 493 aaKnown RBP12.62□□□□□ -0.39
SCN3B-206ENST00000530277 UGP2Q16851 508 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 RINLQ6ZS11 566 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 TMC7Q7Z402 723 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 SEC14L1Q92503 715 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 COPS7BQ9H9Q2 264 aaPredicted RBP12.62□□□□□ -0.39
SCN3B-206ENST00000530277 ZMYND8Q9ULU4 1186 aaPredicted RBP12.62□□□□□ -0.39
SCN3B-206ENST00000530277 EP400Q96L91 3159 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 CBX4O00257 560 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 RHOBTB1O94844 696 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 MAPK10P53779 464 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 DSG1Q02413 1049 aa12.62□□□□□ -0.39
SCN3B-206ENST00000530277 PLOD1Q02809 727 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms