RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 LRMPQ12912 555 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 ENPP2Q13822 863 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 PUM1Q14671 1186 aaKnown RBP eCLIP7.37□□□□□ -1.23
ITGB1-218ENST00000528877 SETDB1Q15047 1291 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 ANO4Q32M45 955 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 PLK5Q496M5 336 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 C2orf27AQ580R0 203 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 EOGTQ5NDL2 527 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 C10orf76Q5T2E6 689 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 PMS2CLQ68D20 193 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 HEATR6Q6AI08 1181 aaKnown RBP7.37□□□□□ -1.23
ITGB1-218ENST00000528877 GRAMD4Q6IC98 578 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 PRR23CQ6ZRP0 262 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 PRR23BQ6ZRT6 265 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 RBM43Q6ZSC3 357 aaKnown RBP7.37□□□□□ -1.23
ITGB1-218ENST00000528877 RSRC2Q7L4I2 434 aaKnown RBP7.37□□□□□ -1.23
ITGB1-218ENST00000528877 KBTBD6Q86V97 674 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 SIX6OS1Q8N1H7 587 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 ALLCQ8N6M5 410 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 TXNDC5Q8NBS9 432 aaKnown RBP7.37□□□□□ -1.23
ITGB1-218ENST00000528877 SHC3Q92529 594 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 P2RY11Q96G91 374 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 IPO9Q96P70 1041 aaKnown RBP7.37□□□□□ -1.23
ITGB1-218ENST00000528877 GABRG3Q99928 467 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 TRIM62Q9BVG3 475 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 BBS2Q9BXC9 721 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 SLC2A11Q9BYW1 496 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 LACRTQ9GZZ8 138 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 LRRC4Q9HBW1 653 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 ABCC13Q9NSE7 274 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 SEMA4GQ9NTN9 838 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 DNAJC17Q9NVM6 304 aaKnown RBP7.37□□□□□ -1.23
ITGB1-218ENST00000528877 POLR3BQ9NW08 1133 aaPredicted RBP7.37□□□□□ -1.23
ITGB1-218ENST00000528877 APEX2Q9UBZ4 518 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 RASAL2Q9UJF2 1139 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 AGO1Q9UL18 857 aaKnown RBP7.37□□□□□ -1.23
ITGB1-218ENST00000528877 PCDHB4Q9Y5E5 795 aa7.37□□□□□ -1.23
ITGB1-218ENST00000528877 A0A1W2PQF6 199 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 NEDD8-MDP1E9PL57 170 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 PDE2AO00408 941 aaPredicted RBP7.36□□□□□ -1.23
ITGB1-218ENST00000528877 ALDH1A2O94788 518 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 CISD3P0C7P0 127 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 P2RY2P41231 377 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 GPD2P43304 727 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 SERPINB4P48594 390 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 PXNP49023 591 aaPredicted RBP7.36□□□□□ -1.23
ITGB1-218ENST00000528877 LIMK1P53667 647 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 EIF4HQ15056 248 aaKnown RBP7.36□□□□□ -1.23
ITGB1-218ENST00000528877 ELF2Q15723 593 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 CAMK4Q16566 473 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 DPCR1Q3MIW9 517 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 USP39Q53GS9 565 aaKnown RBP7.36□□□□□ -1.23
ITGB1-218ENST00000528877 SPDYCQ5MJ68 293 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 BSPRYQ5W0U4 402 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 PMF1Q6P1K2 205 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 CEP68Q76N32 757 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 RRAGAQ7L523 313 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 FMNL3Q8IVF7 1028 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 FAM114A1Q8IWE2 563 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 ZNF513Q8N8E2 541 aaPredicted RBP7.36□□□□□ -1.23
ITGB1-218ENST00000528877 TMEM102Q8N9M5 508 aaPredicted RBP7.36□□□□□ -1.23
ITGB1-218ENST00000528877 NETO1Q8TDF5 533 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 WFDC12Q8WWY7 111 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 PIWIL1Q96J94 861 aaKnown RBP7.36□□□□□ -1.23
ITGB1-218ENST00000528877 NUP62CLQ9H1M0 184 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 DUSP15Q9H1R2 295 aaPredicted RBP7.36□□□□□ -1.23
ITGB1-218ENST00000528877 AKTIPQ9H8T0 292 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 NUDT5Q9UKK9 219 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 USP18Q9UMW8 372 aa7.36□□□□□ -1.23
ITGB1-218ENST00000528877 SLC12A8A0AV02 714 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 TBC1D3BA6NDS4 549 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 ANTXRLA6NF34 631 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 A6NHS1 94 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 BECN2A8MW95 431 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 PRRT4C9JH25 899 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 H3BRJ5 948 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 SLC30A4O14863 429 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 IRAK2O43187 625 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 MED7O43513 233 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 RHOBTB1O94844 696 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 IGLV3-25P01717 112 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 LTFP02788 710 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 ZNF806P0C7X5 589 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 HOXB2P14652 356 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 PON1P27169 355 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 HOXD9P28356 352 aaPredicted RBP7.35□□□□□ -1.23
ITGB1-218ENST00000528877 NTSR1P30989 418 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 HOXD12P35452 270 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 MPLP40238 635 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 ACADSBP45954 432 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 HARS2P49590 506 aaKnown RBP7.35□□□□□ -1.23
ITGB1-218ENST00000528877 MFAP3P55082 362 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 PDCLQ13371 301 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 E2F5Q15329 346 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 LPAL2Q16609 132 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 MAN2A1Q16706 1144 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 EXOC3L4Q17RC7 722 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 RSPO4Q2I0M5 234 aaPredicted RBP7.35□□□□□ -1.23
ITGB1-218ENST00000528877 MIIPQ5JXC2 388 aa7.35□□□□□ -1.23
ITGB1-218ENST00000528877 NKAPLQ5M9Q1 402 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms